Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20muehlenbergii_20[genbank_20GCA_5F000611775.1_202014-
04-02] 7 sequences; 34,812,353 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq2 96.9 3e-15
>seq2
Length=7009248
Score = 96.9 bits (106), Expect = 3e-15
Identities = 141/197 (72%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478
||||||| || ||||||||||| ||| | || | | ||||| || || || ||||
Sbjct 3059371 TTGACTCTTTCTGAATGTTGTAATCGGAAAGTGTCCTCCCATCCTCCAGCTGCTTGCCGG 3059312
Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538
| | || ||||||||||| ||||| || || |||||||| || || || || |
Sbjct 3059311 CAAATATGAGACGCTGTTGATCCGGTGGGATGCCTTCTTTATCCTGTATCTTCGACTTCA 3059252
Query 138539 -ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597
|||| || | |||||| | |||||| || |||| || | || || |||||||| ||
Sbjct 3059251 CATTG-TCGATGGTGTCTGACGACTCAACTTCGAGGGTAATAGTCTTGCCAGTCAGTGTC 3059193
Query 138598 TTTACAAAAATCTGCAT 138614
|| || || ||||||||
Sbjct 3059192 TTGACGAAGATCTGCAT 3059176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262356577040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |