Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20muehlenbergii_20[genbank_20GCA_5F000611775.1_202014-
04-02] 7 sequences; 34,812,353 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq2 93.3 2e-13
>seq2
Length=7009248
Score = 93.3 bits (102), Expect = 2e-13
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || ||||||||||| || |||||||| || || ||||| || ||
Sbjct 3059176 ATGCAGATCTTCGTCAAGACACTGACTGGCAAGACTATTACCCTCGAAGTTGAGTCGTCA 3059235
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | ||| || | | || || || || ||||| ||||| || || || ||||||
Sbjct 3059236 GACACCATCGACAATGTGAAGTCGAAGATACAGGATAAAGAAGGCATCCCACCGGATCAA 3059295
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||| | || || | || || || || || ||||| || || | | ||||| ||
Sbjct 3059296 CAGCGTCTCATATTTGCCGGCAAGCAGCTGGAGGATGGGAGGACACTTTCCGATTACAAC 3059355
Query 391230 ATTGATAAGGATGCAACACTTCAC 391253
||| | || || |||| || |||
Sbjct 3059356 ATTCAGAAAGAGTCAACCCTCCAC 3059379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975718222802756
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |