Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20muehlenbergii_20[genbank_20GCA_5F000611775.1_202014-
04-02] 7 sequences; 34,812,353 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq1 89.7 4e-12
>seq1
Length=10671843
Score = 89.7 bits (98), Expect = 4e-12
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468
||||| || || || || || ||||| || || ||||| || || |||||||| | ||
Sbjct 5945264 ACTGTCCCCGCCTACTTCAACGACTCCCAGCGCCAAGCAACAAAGGATGCTGGTCTGATC 5945205
Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528
||||| || || || || ||||||||||| || || || || ||||| |||| || ||
Sbjct 5945204 GCTGGTCTAAACGTCCTACGTATTATCAACGAGCCCACCGCCGCTGCTATTGCCTACGGT 5945145
Query 550529 CTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGA 550572
||||| || | | ||| || | ||||| ||||| || ||
Sbjct 5945144 CTTGACAAGAAAACTGAGGGCGAGCGCAATGTTCTCATATTCGA 5945101
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029295629808430
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |