Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Umbilicaria_20muehlenbergii_20[genbank_20GCA_5F000611775.1_202014- 04-02] 7 sequences; 34,812,353 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq4 98.7 6e-15 >seq4 Length=4557415 Score = 98.7 bits (108), Expect = 6e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||||||||| ||||| || || ||||||||||| || || ||||| || || ||| Sbjct 4172650 ACTGTTCCAGCCTATTTCAACGACTCTCAACGTCAGGCTACCAAAGACGCAGGCCAAATC 4172591 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||||| ||||| | ||| | | || ||||| || || ||||| |||||||| ||| Sbjct 4172590 GCTGGTCTCAATGTCCTCCGTGTGGTCAACGAACCTACCGCGGCCGCGCTTGCTTACGGT 4172531 Query 474866 CTTGATAAG 474874 || || ||| Sbjct 4172530 CTGGAAAAG 4172522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268178899736036