Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20muehlenbergii_20[genbank_20GCA_5F000611775.1_202014-
04-02] 7 sequences; 34,812,353 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq1 488 7e-133
seq3 221 2e-52
seq2 179 5e-40
seq5 109 7e-19
seq4 102 1e-16
>seq1
Length=10671843
Score = 488 bits (540), Expect = 7e-133
Identities = 1036/1535 (67%), Gaps = 16/1535 (1%)
Strand=Plus/Minus
Query 195351 ATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTG 195410
|||| || | || || || | || ||||| || ||||| || || || |||| |||||
Sbjct 5945629 ATGACCGCATTGAAATCATTGCCAACGACCAGGGCAACCGGACGACCCCGTCGTTCGTTG 5945570
Query 195411 CCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACC 195470
| || || || | || |||||| | || || | || || || ||| || |||||||
Sbjct 5945569 CTTTCACCGACACCGAGCGTCTCATCGGCGACTCAGCCAAGAACCAGGTCGCCATGAACC 5945510
Query 195471 CTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAG 195530
| | || || ||||| || || |||||||| || ||||| || || | ||| | |
Sbjct 5945509 CGACAAACACAGTCTTCGATGCCAAGCGTCTCATCGGTCGTAAATTCGCCGATGCTGAGG 5945450
Query 195531 TCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTA 195590
| || | ||| || ||| | | | | |||| || | ||||| |||||
Sbjct 5945449 TGCAGGCCGACATGAAGCATTTCCCGTTCAAAGTCGTA---GAGAAGGCTGGGAAGCCAG 5945393
Query 195591 TGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTA 195650
|||| | || || || | || |||| || |||| | || ||||| || || || |
Sbjct 5945392 TGATCCAGGTCGAGTTCAAGGGCGAGACCAAGTCATTTACACCAGAAGAGATCTCATCAA 5945333
Query 195651 TGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATG 195710
|||| |||| ||||||| |||||| || || || | | ||||| || || || | |
Sbjct 5945332 TGGTCTTGACCAAGATGAGGGAGACCGCCGAGTCATACTTGGGTGGCACCGTCAACAACG 5945273
Query 195711 CAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTG 195770
| || || ||||| || || ||||||| || || || || || || |||||||| ||||
Sbjct 5945272 CCGTCGTCACTGTCCCCGCCTACTTCAACGACTCCCAGCGCCAAGCAACAAAGGATGCTG 5945213
Query 195771 CTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATT 195829
| || || ||||||||| ||| || | |||||||| || || || || ||||| |||
Sbjct 5945212 GTCTGATCGCTGGTCTAAAC-GTCCTACGTATTATCAACGAGCCCACCGCCGCTGCTATT 5945154
Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889
|| || ||||| |||||||| | || | || ||||| | || || || | |||
Sbjct 5945153 GCCTACGGTCTTGACAAGAAAACTGAGGGCGAGCGCAATGTTCTCATATTCGACTTGGGT 5945094
Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949
||||| || || ||||||||||| | | || || | ||||| ||||| || ||| |
Sbjct 5945093 GGTGGAACCTTCGATGTCTCACTCTTGACCATCGAGGAGGGTATTTTCGAGGTCAAGTCG 5945034
Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTT 196008
||||| ||||| || ||| | || ||||| || ||||| || || | || ||
Sbjct 5945033 ACTGCCGGTGACACGCATTTGGGCGGTGAGGACTTCGACAACCGCCTGGTGAACCACTTC 5944974
Query 196009 GTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCG 196068
||| | |||||| || ||| | ||||| ||| |||| || || | ||||| ||
Sbjct 5944973 GTC-AACGAGTTCAAGCGCAAGCACAAGAAGGATCTTTCCACCAACGCTCGTGCTCTGCG 5944915
Query 196069 TCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAAT 196128
||| || | || || || || || |||||||| |||||||| || |||| |||||
Sbjct 5944914 TCGTCTCCGAACAGCTTGCGAGCGGGCCAAACGCACTCTCTCATCATCGGCACAAACCTC 5944855
Query 196129 GGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACG 196188
| |||| || || || | | || || || |||||||| || | || |||||||| ||
Sbjct 5944854 GATTGAAATCGACTCCCTATACGAAGGTATCGACTTCTACACCTCCATCACCCGTGCCCG 5944795
Query 196189 TTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACT 196248
||| || ||| | | || |||| | ||||| |||||||| | || ||
Sbjct 5944794 TTTCGAGGAGCTTTGCCAGGACCTGTTCCGCTCCACCATGGAGCCTGTTGAGCGTGTCCT 5944735
Query 196249 TCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAAC 196308
||||||||| ||||| || ||||| || | || || ||| | || || || || ||
Sbjct 5944734 TCGTGACGCCAAGATCGACAAGTCCTCCGTCCACGAGATCGTCTTGGTCGGTGGTTCCAC 5944675
Query 196309 CCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAA 196368
||||||||| ||||| || || | |||| ||||||||| || || ||||
Sbjct 5944674 CCGTATTCCCAAGATCCAGAAGCTTGTTTCCGACTTCTTCAACGGCAAGGAGCCCAACAG 5944615
Query 196369 AACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTC 196428
| |||||||| ||||| || || || || ||||| ||||| ||||| || || |||||
Sbjct 5944614 GTCAATCAACCCCGATGAGGCTGTCGCATACGGTGCCGCCGTCCAGGCCGCCATCCTCTC 5944555
Query 196429 AGGTGTTGACA-ATAAT--AA--CGTCCAA-GATCTTCTGCTACTTGATGTTGCACCCGT 196482
|| ||||| | || || || |||| || | || || || ||||| | || |
Sbjct 5944554 CGG---TGACACCTCATCCAAGTCGACCAACGAAATCCTACTTCTCGATGTCTCTCCATT 5944498
Query 196483 ATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAAC 196542
||||| ||| | || || || |||||||| ||||| | | || | ||||||| ||
Sbjct 5944497 GTCCCTTGGTATCGAGACCGCTGGTGGTGTCATGACGGCACTCATCAAGCGGAACACCAC 5944438
Query 196543 TATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCA 196602
|| || || |||||| | || || || || | || || || || || || ||
Sbjct 5944437 CATCCCAACAAAGAAGTCTGAGGTGTTCTCGACATTCTCTGACAACCAGCCGGGAGTGTT 5944378
Query 196603 TATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTT 196662
|| || || | || || || || | ||| | ||||| ||| | ||||| || | ||
Sbjct 5944377 GATCCAGGTCTTCGAGGGCGAGCGTGCTCGTACCAAGGACAACAACCTACTGGGCAAGTT 5944318
Query 196663 CGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGA 196722
||| | || || || ||| | || || | |||||||| || ||| | ||| ||||||
Sbjct 5944317 CGAGCTTACTGGTATCCCACCCGCTCCACGTGGTGTTCCTCAAATTGAGGTTACCTTCGA 5944258
Query 196723 TATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGA 196782
| | ||||| || || || | |||||| | ||| || |||| | || || | |
Sbjct 5944257 TCTTGACGCCAACGGTATCATGAACGTCTCCGCTCTCGAGAAGGGCACCGGGAAGACCAA 5944198
Query 196783 AAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGT 196842
||||| || || ||||| |||||||| || || || ||||| || || || |||||| |
Sbjct 5944197 CAAGATCGTTATCACCAACGACAAGGGACGTCTGTCGAAGGAAGATATCGAGCGTATGTT 5944138
Query 196843 TCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877
|| || || ||||||| || || || ||||
Sbjct 5944137 GGCTGAGGCCGAGAAGTACAAGGCCGAGGATGAGG 5944103
Score = 134 bits (148), Expect = 2e-26
Identities = 139/182 (76%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 171870 CTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAAT 171929
||| || || ||||| || || || || |||||||||||||| || ||| ||||||||
Sbjct 8978420 CTTCGTCAAGACCCTCACGGGTAAGACCATCACCCTCGAGGTCGAATCGAGCGACACAAT 8978361
Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989
||| || ||||| |||| || || || ||||||||||| ||||| || ||||| ||| |
Sbjct 8978360 CGACAATGTCAAATCCAAAATCCAGGACAAGGAAGGCATCCCACCGGACCAGCAGCGATT 8978301
Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049
|| ||||| || || ||| | || ||||| ||||| || | || |||||| | || ||
Sbjct 8978300 GATCTTTGCGGGCAAGCAGTTGGAGGATGGCCGTACACTTTCCGACTACAACATCCAGAA 8978241
Query 172050 GG 172051
||
Sbjct 8978240 GG 8978239
Score = 86.0 bits (94), Expect = 8e-12
Identities = 148/209 (71%), Gaps = 7/209 (3%)
Strand=Plus/Minus
Query 60474 ATGAAGACCTTCGTCACGACTAATAAGTTCATTACTGAAACAAAGTCCGGGAAGTAGACC 60533
||||||||| ||||| ||| |||||||| || ||| || || || | |||||
Sbjct 3823247 ATGAAGACCCTCGTCGCGAGAGATAAGTTCGTTTGAGAAGGTCAGACCCGGCATAAGACC 3823188
Query 60534 CCGCTTCTTTAACCAATATACAGCACAGAACGAACCACTGAAAAAGATACCCTCTACACA 60593
|||||||| | ||| | | | | ||| ||||| || || ||||||||||| |||
Sbjct 3823187 GCGCTTCTTAAGCCAGAAGATGGAAGCGAAAGAACCGCTAAAGAAGATACCCTCAACAGC 3823128
Query 60594 CGCAAACGCAAAAAGACGTTCAGCAAATGGTCTAGAT-TTGTC---AAACCATTTCATGG 60649
|| || |||| ||| |||| |||||| ||| || | || || | |||||| || |
Sbjct 3823127 AGCGAAGGCAACAAGGCGTTGAGCAAA-GGTAGAGTTCTTATCTTGGATCCATTTGATAG 3823069
Query 60650 CCCATTCAGCCTTTCGTTC-GATACAAGG 60677
|||| || | ||||| | | |||||||||
Sbjct 3823068 CCCAGTC-GGCTTTCTTGCGGATACAAGG 3823041
>seq3
Length=5817774
Score = 221 bits (244), Expect = 2e-52
Identities = 486/722 (67%), Gaps = 15/722 (2%)
Strand=Plus/Plus
Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778
|||||||| |||||||||| || ||||| ||||| ||||| ||||||| ||| |||
Sbjct 252342 ACTGTACCAGCTTACTTCAACGACAACCAACGTCAGGCAACAAAAGACGCTGGTGCCATT 252401
Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838
|| | ||| | || | |||||||| |||||||| || || || ||||| || |||
Sbjct 252402 GCTGATCTGCAAGTCCTCCGGATTATCAACGAACCAACCGCTGCCGCGATTGCGTACGGT 252461
Query 195839 CT--GGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTG 195893
|| || | | |||| || | || |||||| |||||| ||||||||||| |
Sbjct 252462 CTAGGGTCTGG--CAAGTCAGAGAAGGAGCGAAATGTTCTGATCTACGATCTCGGTGGAG 252519
Query 195894 GTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTG 195953
| || || |||||||| ||| | |||| | || ||| | || || ||||||||||
Sbjct 252520 GAACTTTCGATGTCTCTCTTTTGCATATCCAGGGCGGTGTCTTTACCGTCAAGGCTACTG 252579
Query 195954 CTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTG 196013
||||||| ||||| | ||||| | || ||||| || || || || ||
Sbjct 252580 CTGGTGACACTCACTTGGGTGGCCAGGACTTCGACACAAACCTGCTTGAGCACTTCAAGA 252639
Query 196014 ATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGC 196073
| || |||| || |||| |||||||| || || || |||| | ||||| || || |
Sbjct 252640 AGGAATTCCAGCGCAAGACCAAGAAAGACATGTCGGGCGATCCACGTGCTCTACGACGTC 252699
Query 196074 TTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGG--CTCAAACAATGGT 196131
|| |||| || ||||| ||||| || || || || || | | || ||||||| | ||
Sbjct 252700 TTCGGACGGCTTGTGAGCGTGCTAAGCGTACGCTATC--CAATGGTACTCAAACTACTGT 252757
Query 196132 TGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTT 196191
||||| || || | || || || |||||| | | || |||||||| || ||
Sbjct 252758 CGAGATCGACTCTCTCTTCGATGGCGAGGACTTCAACGCTCAAATCACCCGTGCCCGATT 252817
Query 196192 TGAAGAGTTAAACTCTGATTTGTTTA--GGAAGTGTATGGAACCTGTTGAACAAGTACTT 196249
||| || | ||| || | || | || | || || || ||| | || || |
Sbjct 252818 TGAGGACCTTAACGCTAAGGCCTTCAATGGCA--CCATCGACCCAGTTCAGCAGGTCTTG 252875
Query 196250 CGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACC 196309
|| ||||| | || ||| || ||||| || ||||| ||||| || ||||| |||
Sbjct 252876 AAGGATGCAAACTTAGACAAGAGCAAAGTTGACGAGATTGTACTTGTTGGTGGATCTACC 252935
Query 196310 CGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAA 196369
|||||||| | ||| ||| || | || || ||| || || | | | ||
Sbjct 252936 CGTATTCCCAGGATACAAAAGCTCCTCAGCGACTACTTTGATGGGAAGAAGCTCGAGAAG 252995
Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429
| |||||||| || || || ||||| || ||||| || |||||||||| ||| || ||
Sbjct 252996 AGCATCAACCCTGACGAGGCTGTTGCCTACGGTGCCGCTGTTCAGGCTGGTATCCTTTCT 253055
Query 196430 GG 196431
||
Sbjct 253056 GG 253057
>seq2
Length=7009248
Score = 179 bits (198), Expect = 5e-40
Identities = 177/229 (77%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919
||||||| ||||| || || || || ||||| || ||||| |||||||| ||||||||||
Sbjct 3059174 GTATGCAGATCTTCGTCAAGACACTGACTGGCAAGACTATTACCCTCGAAGTTGAGTCGT 3059233
Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979
||||||| ||||| || | || | ||||| || ||||| |||||||| ||||| ||||
Sbjct 3059234 CAGACACCATCGACAATGTGAAGTCGAAGATACAGGATAAAGAAGGCATCCCACCGGATC 3059293
Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039
| || || || || ||||| || || ||||| || ||||| | || || | |||||||
Sbjct 3059294 AACAGCGTCTCATATTTGCCGGCAAGCAGCTGGAGGATGGGAGGACACTTTCCGATTACA 3059353
Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
|| |||| || ||||| || || |||||||| || | || || |||||
Sbjct 3059354 ACATTCAGAAAGAGTCAACCCTCCACCTTGTCCTTCGTCTACGTGGTGG 3059402
Score = 172 bits (190), Expect = 7e-38
Identities = 169/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 171872 TTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCG 171931
||||||| || || |||||||| || |||||| | ||||| || || || || || ||||
Sbjct 3058958 TTGTGAAGACGCTCACTGGAAAGACCATCACCTTGGAGGTGGAATCCTCGGATACCATCG 3059017
Query 171932 ATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTA 171991
| || |||| || ||||| || || ||||| |||||||| || |||||||| || | |
Sbjct 3059018 ACAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCAGCAGCGCTTGA 3059077
Query 171992 TTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGG 172051
| ||||| || || |||||||| ||||||||||| || |||| |||||| |||||||||
Sbjct 3059078 TCTTTGCCGGCAAGCAGCTTGAGGATGGACGTACTCTGTCTGACTACAACATTCAAAAGG 3059137
Query 172052 AGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
| || ||||| ||||| || || | || || || |||
Sbjct 3059138 AATCCACTCTTCACCTCGTCCTTCGTCTCCGTGGCGGT 3059175
Score = 163 bits (180), Expect = 4e-35
Identities = 158/203 (78%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945
|| || || || |||||||| ||||| ||||| || ||||| |||||||| |||| ||
Sbjct 3058689 ACCGGCAAGACCATCACCCTTGAGGTGGAGTCTTCGGACACCATCGATAATGTCAAGTCC 3058748
Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005
|||||||| || |||||||||||||| || |||||||| || | || || ||||| ||
Sbjct 3058749 AAGATTCAGGACAAGGAAGGCATTCCCCCGGATCAGCAGCGCTTGATCTTCGCTGGCAAG 3058808
Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065
||||| ||||| || ||||| || | || |||||| |||| |||||||| ||||| |||
Sbjct 3058809 CAGCTCGAAGACGGCCGTACTCTATCGGACTACAACATTCAGAAGGAGTCCACTCTTCAC 3058868
Query 172066 CTTGTTCTAAGGCTTCGGGGTGG 172088
| || ||| | || || || ||
Sbjct 3058869 TTGGTCCTACGTCTCCGCGGAGG 3058891
Score = 136 bits (150), Expect = 5e-27
Identities = 170/233 (73%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||| |||||||| || || ||||| ||||| || |||||| | || ||||||
Sbjct 3059627 GTGGTATGCAGATCTTTGTCAAGACGCTTACCGGAAAGACGATCACCTTGGAAGTTGAGA 3059686
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
|| ||||| || || ||| | || |||||| || || || || || || || || |
Sbjct 3059687 GTTCCGACACGATTGACAACGTTAAGAGCAAGATCCAGGACAAAGAGGGTATCCCGCCGG 3059746
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
| ||||| || | ||||||||||| || ||||| || ||||| || || | | ||||
Sbjct 3059747 ACCAGCAGCGTTTGATTTTTGCTGGGAAGCAGCTGGAGGATGGCCGAACGTTGTCGGATT 3059806
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
||||| | || |||||| || || || | || || |||||||| || |||
Sbjct 3059807 ACAACATCCAGAAGGAGAGCACCCTGCATTTGGTGCTTAGGCTTCGTGGCGGT 3059859
Score = 132 bits (146), Expect = 6e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||| || || || |||||||| || || || || || || || || || |||
Sbjct 3059404 ATGCAGATCTTCGTAAAGACGCTTACTGGGAAGACAATAACGCTGGAAGTCGAATCATCA 3059463
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||||||||| ||| |||| | ||||| ||||| || || || || ||||| || ||
Sbjct 3059464 GACACAATCGACAACGTCAAGTCGAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAA 3059523
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| ||| | || || || || || ||| | ||||| || || || || ||||||||||
Sbjct 3059524 CAGCGATTGATCTTCGCCGGCAAGCAGTTGGAAGACGGCCGGACACTGAGTGATTACAAC 3059583
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
| ||||| ||| || | ||| | ||||| | || || ||||||
Sbjct 3059584 ATCCAAAAAGAGAGCACATTGCACTTGGTTCTTCGTCTGCGCGGTGGT 3059631
>seq5
Length=2817054
Score = 109 bits (120), Expect = 7e-19
Identities = 248/366 (68%), Gaps = 9/366 (2%)
Strand=Plus/Plus
Query 195626 TTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGA-ATC 195684
||| | ||||||||| |||| | ||||| | ||||||||||||| || || | |
Sbjct 1477882 TTTACGCCCGAAGAAGTTTCCGCCATGGTCCTTGGGAAGATGAAGGAGATCGCCGAGAGC 1477941
Query 195685 TTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTC 195744
| || | || || | || | | || ||||| || || || || ||||||| ||
Sbjct 1477942 TATC-TAGGAAAGAAGGTCGATCACGCCGTTGTCACGGTCCCAGCATACTTCAACGACAA 1478000
Query 195745 ACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTAT 195804
|| | || || ||||||||||||| | || || ||| | ||| |||| | || |
Sbjct 1478001 CCAGAGGCAAGCTACAAAGGACGCTGGCGTCATCGCTGGTTTGAACGTTCTTCGCGTTGT 1478060
Query 195805 CAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGA--T 195862
||| || || || ||||| || || || || |||||||||||| |||| |||||
Sbjct 1478061 CAACGAGCCCACCGCGGCCGCGATCGCGTACGGTCTGGACAAG---AAGGGTGAAGAGCG 1478117
Query 195863 AAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATT 195922
| || ||| | | | ||| | ||||| ||||| || ||||| || || ||| ||
Sbjct 1478118 CCAGAT-TATCG-TGTATGACTTGGGTGGAGGTACTTTCGATGTTTCTCTCCTCTCCATC 1478175
Query 195923 GAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGAT 195982
|| ||| | || || || | ||| || |||||||| || || | || || || |||
Sbjct 1478176 GACAACGGTGTTTTTGAGGTCATGGCAACAGCTGGTGACACCCACTTGGGAGGAGAGGAT 1478235
Query 195983 TTCGAT 195988
||||||
Sbjct 1478236 TTCGAT 1478241
>seq4
Length=4557415
Score = 102 bits (112), Expect = 1e-16
Identities = 225/332 (68%), Gaps = 18/332 (5%)
Strand=Plus/Minus
Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721
|| ||||||||||| || || | ||| | || | || || ||| || || |||
Sbjct 4172707 AAAATGAAGGAGACGGCAGAGGCGCATATGAGCAAGAGCGTCAAGAATGGTGTCGTCACT 4172648
Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781
|| || || || |||| || || ||||| ||||| || || ||||| | || ||
Sbjct 4172647 GTTCCAGCCTATTTCAACGACTCTCAACGTCAGGCTACCAAAGACGCAGGCCAAATCGCT 4172588
Query 195782 GGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840
||||| || ||| || | | |||| ||||| || ||||| || ||||||| |||||
Sbjct 4172587 GGTCTCAA-TGTCCTCCGTGTGGTCAACGAACCTACCGCGGCCGCGCTTGCTTACGGTCT 4172529
Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGT-ATT--GATCTTTGATCTCGGTGGTGGTAC 195897
||| ||| |||||| | ||| ||| | ||| || | |||||||| ||
Sbjct 4172528 GGAAAAG---------GAAGATGATCGTGTGATTGCGGTCTACGACTTGGGTGGTGGAAC 4172478
Query 195898 GTTTGATGTCTCACTTCTCAATAT--TGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955
|| ||| |||| ||||| | || |||| || | ||||| || ||| | || |
Sbjct 4172477 TTTCGATATCTCGGTTCTCGAGATCCAGAAG--GGCGTCTTCGAGGTCAAGTCCACCAAT 4172420
Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
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Sbjct 4172419 GGTGATACCCATCTCGGCGGTGAAGACTTCGA 4172388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657862342437040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |