Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20muehlenbergii_20[genbank_20GCA_5F000611775.1_202014-
04-02] 7 sequences; 34,812,353 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq2 82.4 7e-11
>seq2
Length=7009248
Score = 82.4 bits (90), Expect = 7e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274
|| || ||||| || |||||||||||| | ||| ||| || || || || || ||
Sbjct 3059372 GTTGACTCTTTCTGAATGTTGTAATCGGAAAGTGTCCTCCCATCCTCCAGCTGCTTGCCG 3059313
Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334
||| | || ||||| || ||||| || || ||||||||||| || || || ||
Sbjct 3059312 GCAAATATGAGACGCTGTTGATCCGGTGGGATGCCTTCTTTATCCTGTATCTTCGACTTC 3059253
Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394
| | || | ||||||| | || ||||| | || | |||||||| |||| |||
Sbjct 3059252 ACATTGTCGATGGTGTCTGACGACTCAACTTCGAGGGTAATAGTCTTGCCAGTCAGTGTC 3059193
Query 137395 TTTACGAATATTTGCATA 137412
|| ||||| || ||||||
Sbjct 3059192 TTGACGAAGATCTGCATA 3059175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488543957252400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |