Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20muehlenbergii_20[genbank_20GCA_5F000611775.1_202014-
04-02] 7 sequences; 34,812,353 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq1 111 4e-19
>seq1
Length=10671843
Score = 111 bits (122), Expect = 4e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 131801 AAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTCTACAAGA 131860
|||||||| || |||||||| |||||||| |||||| | | ||| ||| || | |
Sbjct 3823053 AAGAAAGCCGACTGGGCTATCAAATGGATCCAAGATAAGAACTCTACCTTTGCTCAACGC 3823112
Query 131861 CTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTT 131920
||||| || || ||| |||||| ||||| |||||| ||| ||||| | | |||||
Sbjct 3823113 CTTGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTTAGCGGTTCTTTCGCTTCCATCTTC 3823172
Query 131921 TGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGA 131980
|||||||||||||| || | ||||| || || | || || || || | ||||| |
Sbjct 3823173 TGGCTTAAGAAGCGCGGTCTTATGCCGGGTCTGACCTTCTCAAACGAACTTATCTCTCGC 3823232
Query 131981 GATGAAGCATTGCATACTGAATTTGC 132006
|| || | | |||||||| || ||
Sbjct 3823233 GACGAGGGTCTTCATACTGACTTCGC 3823258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812693557727
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |