Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20muehlenbergii_20[genbank_20GCA_5F000611775.1_202014-
04-02] 7 sequences; 34,812,353 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq2 105 6e-18
>seq2
Length=7009248
Score = 105 bits (116), Expect = 6e-18
Identities = 141/196 (72%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987
|||||||||| ||||||||||| ||| | || | | ||| || ||||| || ||||
Sbjct 3059371 TTGACTCTTTCTGAATGTTGTAATCGGAAAGTGTCCTCCCATCCTCCAGCTGCTTGCCGG 3059312
Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047
| | || |||||||||||||| || || |||||||||||||| || || ||||
Sbjct 3059311 CAAATATGAGACGCTGTTGATCCGGTGGGATGCCTTCTTTATCCTGTATCTTCGACTTCA 3059252
Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107
| || | || || | || ||| ||||||| || | || || |||||||| || |
Sbjct 3059251 CATTGTCGATGGTGTCTGACGACTCAACTTCGAGGGTAATAGTCTTGCCAGTCAGTGTCT 3059192
Query 132108 TTATGAAAATCTGCAT 132123
| | ||| ||||||||
Sbjct 3059191 TGACGAAGATCTGCAT 3059176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476611158296520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |