Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Umbilicaria_20muehlenbergii_20[genbank_20GCA_5F000611775.1_202014- 04-02] 7 sequences; 34,812,353 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2 100 2e-16 >seq2 Length=7009248 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || ||||| ||||| ||||| ||| | | | | | || || ||||| || ||| Sbjct 3059372 GTTGACTCTTTCTGAATGTTGTAATCGGAAAGTGTCCTCCCATCCTCCAGCTGCTTGCCG 3059313 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | |||||||||||||||||||| || | || |||||||| ||||| ||| Sbjct 3059312 GCAAATATGAGACGCTGTTGATCCGGTGGGATGCCTTCTTTATCCTGTATCTTCGACTTC 3059253 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||||| | |||||||| || || |||| ||||| ||||| || Sbjct 3059252 ACATTGTCGATGGTGTCTGACGACTCAACTTCGAGGGTAATAGTCTTGCCAGTCAGTGTC 3059193 Query 27231 TTCACAAAGATTTGCATA 27248 || || ||||| |||||| Sbjct 3059192 TTGACGAAGATCTGCATA 3059175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934363747784