Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20muehlenbergii_20[genbank_20GCA_5F000611775.1_202014-
04-02] 7 sequences; 34,812,353 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq4 91.5 1e-13
>seq4
Length=4557415
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 29849 CTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCG 29908
|| ||||| || || || || |||| || ||||||| |||||||| || ||||||
Sbjct 3812214 CTTGGCTCTCTTTCTAGTTGTACTTTCAACGCATCCACGTGGTCCAGGTACACATGAGCG 3812155
Query 29909 TCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTAC 29968
||||||| |||| | ||| ||||| || | || ||||| | ||| | |
Sbjct 3812154 TCTCCCATTGTGTGTATGAACGTCCCCGGCGTAAGATCACAAACATGAGCGAGCATATGC 3812095
Query 29969 GTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTC 30028
||||||| || |||| ||||||||| ||||| || ||||| || || || | || |
Sbjct 3812094 GTGAGGATAGCGTAGGAGGCGATGTTGAAGGGCACGCCGAGACCAATATCGCAAGAGCGT 3812035
Query 30029 TGGTAGAGCTGACACGAGAG 30048
||||| || ||||| || ||
Sbjct 3812034 TGGTATAGTTGACAGGATAG 3812015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406310365336644
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |