Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F000938525.1_202015-03-03]
3,891 sequences; 39,229,750 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq3736 122 1e-22
>seq3736
Length=790089
Score = 122 bits (134), Expect = 1e-22
Identities = 178/249 (71%), Gaps = 2/249 (1%)
Strand=Plus/Minus
Query 145918 AGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGAT 145976
|||||||| |||||||| ||| |||||| || |||| | || | || || |||| |
Sbjct 520019 AGGTCCGCTGGGTTCCAAGCGCTGAGGATGATTCTCC-GATCATACGGCTTGTTCTTCAG 519961
Query 145977 CTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTC 146036
|| | || | ||| ||||| || || || ||||| ||||||||||| | ||
Sbjct 519960 CTTGTCAATAACCTCCGCCAGCTGATCGACCCCTTGCCCAGTATAATCTGTCTTCGCATC 519901
Query 146037 CACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGG 146096
||||||| | || ||||| |||| |||||||||||||||||| || || ||||| ||
Sbjct 519900 CACGTACTCCGCACCGAAATGCCGCCACTGGAACCCGTAGACAGGACCTAGGTCGCCCAC 519841
Query 146097 CTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGAT 146156
|| | || || ||| | | | ||||| || || || || ||| ||||||||||
Sbjct 519840 ATCTCGATGAGAAAGGCCGACACTATCAAGGAACTCACGCGAGCCATTGCCGTCCCAGAT 519781
Query 146157 CTTGACGCC 146165
||||| |||
Sbjct 519780 CTTGATGCC 519772
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590048100139640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |