Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F000938525.1_202015-03-03] 3,891 sequences; 39,229,750 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq3736 122 1e-22 >seq3736 Length=790089 Score = 122 bits (134), Expect = 1e-22 Identities = 178/249 (71%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 145918 AGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGAT 145976 |||||||| |||||||| ||| |||||| || |||| | || | || || |||| | Sbjct 520019 AGGTCCGCTGGGTTCCAAGCGCTGAGGATGATTCTCC-GATCATACGGCTTGTTCTTCAG 519961 Query 145977 CTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTC 146036 || | || | ||| ||||| || || || ||||| ||||||||||| | || Sbjct 519960 CTTGTCAATAACCTCCGCCAGCTGATCGACCCCTTGCCCAGTATAATCTGTCTTCGCATC 519901 Query 146037 CACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGG 146096 ||||||| | || ||||| |||| |||||||||||||||||| || || ||||| || Sbjct 519900 CACGTACTCCGCACCGAAATGCCGCCACTGGAACCCGTAGACAGGACCTAGGTCGCCCAC 519841 Query 146097 CTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGAT 146156 || | || || ||| | | | ||||| || || || || ||| |||||||||| Sbjct 519840 ATCTCGATGAGAAAGGCCGACACTATCAAGGAACTCACGCGAGCCATTGCCGTCCCAGAT 519781 Query 146157 CTTGACGCC 146165 ||||| ||| Sbjct 519780 CTTGATGCC 519772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590048100139640