Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F000938525.1_202015-03-03]
3,891 sequences; 39,229,750 total letters
Query= NC_003324.1
Length=57416
Score E
Sequences producing significant alignments: (Bits) Value
seq1765 165 3e-36
>seq1765
Length=689
Score = 165 bits (182), Expect = 3e-36
Identities = 197/265 (74%), Gaps = 2/265 (1%)
Strand=Plus/Minus
Query 41873 CGGCTGCACCCAAATCGGCTGATTAGACAGCATGAACGTCTCGCCGGTCATGGCGAGCAG 41932
|||| | ||||| |||||| | || |||||||| ||||||||| | ||||||||
Sbjct 405 CGGCCGAACCCAGATCGGCAGGGCGGAAAGCATGAAGCTCTCGCCGGACCACGCGAGCAG 346
Query 41933 CAGTGTGGTTCCCATAACGTCGGCGATCGCAGTCGCCGCATCCGGAGGTACCGCGTTCCC 41992
||| || || |||| |||||| ||||| |||||||| || || || |||||||| ||
Sbjct 345 CAGCGTCTTTGCCATCGTGTCGGCAATCGCCGTCGCCGCGTCGGGCGGAACCGCGTTGCC 286
Query 41993 GATGCGCTCTCGCCAAGCGGAATCGGACTGGCCGTCGAGGGTGAATAT-CTCGTCTGGAT 42051
||||||||| |||||| | ||||||| ||||||||| | | || | || ||||| |
Sbjct 285 GATGCGCTCGCGCCAATTCGCATCGGACAGGCCGTCGA-GTTCAAGCTGTTCCTCTGGGT 227
Query 42052 CAACGAGGCTCTGCAACGCCGCTAACTCGAGAGTGGTGAACGGACGATGCCACGTGCCAT 42111
| ||||||| |||||| || || | ||| |||||||| || || |||||||| | |
Sbjct 226 CCACGAGGCCCTGCAAAGCGGCCAGTTCGTACGTGGTGAAAGGCCGGTGCCACGTTTCGT 167
Query 42112 CAAGCGCACGGATTACGGCAACGAG 42136
| | ||||| ||||| |||||
Sbjct 166 CTGGGCTGCGGATGACGGCCACGAG 142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 183601116203676
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |