Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F000938525.1_202015-03-03]
3,891 sequences; 39,229,750 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq3328 82.4 5e-11
>seq3328
Length=87304
Score = 82.4 bits (90), Expect = 5e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTC 43971
||||| || || ||||||||||| || || || ||||| || || |||| ||
Sbjct 26255 CACCAGGTGCAGGGTGCTCTCTTTCTGGATGTTGTAATCCGACAAAGTCCGGCCATCCTC 26196
Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031
|| || ||||| ||||| ||||| || |||||||| | || | ||| ||||||||
Sbjct 26195 CAGCTGCTTTCCAGCAAAGATCAAGCGCTGCTGGTCTGGTGGAATACCCTCTTTATCCTG 26136
Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091
||| || ||||| || ||| || || | ||| || || | || || || ||
Sbjct 26135 AATCTTGCTCTTGACGTTATCAATTGTGTCGGAGCTCTCAACTTCCAAGGTGATCGTCTT 26076
Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| || | |||||| ||||| || |||||
Sbjct 26075 TCCAGTAAGAGTCTTGACAAAGATCTGCAT 26046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354760775891868
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |