Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F000938525.1_202015-03-03] 3,891 sequences; 39,229,750 total letters Query= NC_008030.1 Length=190054 Score E Sequences producing significant alignments: (Bits) Value seq867 93.3 5e-14 >seq867 Length=266569 Score = 93.3 bits (102), Expect = 5e-14 Identities = 123/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 169726 TGGGCCCCATCTACTACCTGCGGCTGCGCCACCTGACCCTCGACAAGGCCACCGTGCGCT 169785 ||||| | ||| ||||| ||| ||||||||| || | ||||||| | || ||| Sbjct 86249 TGGGCGTCGTCTTCTACCAGCGCCTGCGCCACATGGTCAACGACAAGTTCCAGGTCCGCA 86308 Query 169786 GC-CGCGGCAAGAAGACCAAGCTGATCCGGCAGGCCAACGAGGGGCGCAAGAAGGGCGGC 169844 | || ||| | ||| || ||| |||| ||| | |||| |||| ||||||||| Sbjct 86309 CCACGGGGCCGGTC-ACCCAGTTGACGGGGCAACCCATCAAGGGCCGCAGCAAGGGCGGC 86367 Query 169845 GGCATCAAGGTGGGCGAAATGGAGCGCGACTGCCTGATCGCGCACGGC 169892 |||||| || ||||||||||||||||| ||||| ||||||||||| Sbjct 86368 GGCATCCGCGTCGGCGAAATGGAGCGCGATAGCCTGCTCGCGCACGGC 86415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608015226221040