Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F000938525.1_202015-03-03] 3,891 sequences; 39,229,750 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq511 93.3 9e-14 >seq511 Length=40481 Score = 93.3 bits (102), Expect = 9e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 333319 TGTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGAT 333378 |||| || || || ||||| ||||| || || | |||||| ||| |||| || || | Sbjct 33096 TGTCCTCGCCAGATGCATACCGCCACGCAATGTAGTCGTTGGGGGTCTTGTCCAGGTGCT 33155 Query 333379 CCTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCC 333438 ||| ||||||||||| || ||||| ||||| || || | ||||| || || ||||||| Sbjct 33156 GCTCAATGTGGTGGAAGGCGTGCTGGGCCACATAGGCTACACGCAGGTTGGGGTGCTTCC 33215 Query 333439 AAACACTTCCGTTGGTGGCTTCCATTTGCCCCGTGAGCACCTTAAT 333484 | ||| | || | | | |||| | ||| ||||||| ||| || Sbjct 33216 ACACAGTGCCCTCTGCAGTCTCCAGCTCCCCAGTGAGCAGCTTGAT 33261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102825017640850