Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F000938525.1_202015-03-03] 3,891 sequences; 39,229,750 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq3328 84.2 9e-11 >seq3328 Length=87304 Score = 84.2 bits (92), Expect = 9e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || ||||| || ||||| || || || || ||||| || Sbjct 25590 ATGCAAATCTTCGTCAAGACGCTCACTGGCAAGACTATCACACTCGAGGTCGAATCGTCA 25649 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | | || || || || ||||||||||| || || || || ||| Sbjct 25650 GACACGATTGACAATGTCAAGTCGAAGATACAGGATAAGGAAGGTATCCCACCGGACCAA 25709 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAAC 391213 || ||| | || ||| |||| || ||||| || ||||| || || Sbjct 25710 CAGCGTCTCATCTTCGCAGGCAAGCAACTGGAGGATGGGAGGAC 25753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975619903646228