Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F000938525.1_202015-03-03]
3,891 sequences; 39,229,750 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq1271 120 4e-22
>seq1271
Length=109735
Score = 120 bits (132), Expect = 4e-22
Identities = 164/224 (73%), Gaps = 4/224 (2%)
Strand=Plus/Plus
Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 102168
|||||| || || | |||||||| || |||||||| || ||| | | |||| | |
Sbjct 95171 AGTTCCTTGCATCCGTAAGAAAGCAGACTGGGCTATCAAATGGATCCAAGACAAGAACTC 95230
Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228
| |||| ||| | || ||| | || || || ||| |||||||| |||||| ||||
Sbjct 95231 -TACCTTCGCTCAACGCCTCGTTGCCTTCGCTGCTGTGGAGGGTATTTTCTTCAGCGGTT 95289
Query 102229 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 102287
|||| ||| | |||| ||||| |||||||| ||||| ||||| || || ||||||
Sbjct 95290 CCTT-TGCATCAATTTTCTGGCTTAAGAAGCGGGGTCTTATGCCGGGCCTGACCTTCTCG 95348
Query 102288 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
||||| ||||||||||| || ||||| || ||| || |||||
Sbjct 95349 AACGAACTTATCTCTCGCGATGAGGGGCTTCACACTGACTTTGC 95392
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620712208641520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |