Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F000938525.1_202015-03-03]
3,891 sequences; 39,229,750 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq3773 511 6e-140
seq3616 224 1e-53
seq3328 172 7e-38
seq3688 149 8e-31
seq1402 116 5e-21
seq256 116 5e-21
seq1350 91.5 2e-13
>seq3773
Length=51578
Score = 511 bits (566), Expect = 6e-140
Identities = 1068/1586 (67%), Gaps = 14/1586 (1%)
Strand=Plus/Minus
Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358
|| ||||| || ||||| || || || || || || |||||| | | | |||| ||
Sbjct 19581 GCAATTGGCATTGATTTGGGGACGACGTATTCTTGCGTTGGTATCTTCCGCGATGACCGG 19522
Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418
| || || || | || ||||| |||||||| || ||||| |||| |||||| || ||
Sbjct 19521 ATTGAAATCATTGCCAACGACCAGGGAAACCGAACCACTCCGTCGTTCGTTGCTTTCACC 19462
Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478
|| | ||| |||||| | || || | || || ||||| || |||||||| | ||
Sbjct 19461 GACACTGAGCGTCTCATCGGTGACTCAGCCAAGAATCAAGTCGCCATGAACCCGACAAAC 19402
Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538
|| ||||| || || |||||||| || |||||||| || | ||| | || || | |
Sbjct 19401 ACCGTCTTCGATGCCAAGCGTCTCATCGGTCGCAAATTCGCTGATGCTGAGGTTCAGGCC 19342
Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598
|| || ||| ||| | | | ||||| || ||| | ||||| | | |
Sbjct 19341 GACATGAAGCACTTCCCGTTCAAGGTTGT---CGAAAAGGCCGGAAAGCCAGTCGTCCAG 19285
Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTG 195658
|| || || | || |||| || ||| | || ||||| || || || ||||| ||
Sbjct 19284 GTCGAGTTCAAGGGCGAGACCAAGTCATTCACACCAGAAGAGATCTCCTCAATGGTCTTA 19225
Query 195659 ATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTG 195718
| ||||||| ||||||||| ||||| | | |||| || || || |||| || |||
Sbjct 19224 ACAAAGATGAGGGAGACTGCCGAATCGTACCTGGGAGGGACAGTCAACAATGCCGTGGTG 19165
Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778
|| || || || || |||| || || ||||| || || ||||| || || | | ||
Sbjct 19164 ACAGTCCCCGCCTATTTCAACGACTCTCAACGTCAAGCAACAAAAGATGCCGGTCTCATC 19105
Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838
|| ||||| ||| ||| | || ||||| ||||| || || ||||| || || || |||
Sbjct 19104 GCTGGTCTCAACGTTCTACGTATCATCAACGAACCCACTGCCGCTGCCATCGCCTACGGT 19045
Query 195839 CTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACG 195898
|| |||||||| | || | || ||||| | ||||| || | || ||||| ||
Sbjct 19044 CTCGACAAGAAGACCGAGGGCGAGCGCAATGTTCTCATCTTCGACTTGGGCGGTGGAACT 18985
Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958
|| |||||||| || | | || || | ||||| ||||| || ||| | ||||| |||
Sbjct 18984 TTCGATGTCTCGCTGTTGACCATCGAGGAGGGTATCTTCGAGGTCAAGTCGACTGCCGGT 18925
Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGAT-GA 196017
|| ||||| | || ||||| || ||||| ||||| || || || ||| ||
Sbjct 18924 GACACTCACTTGGGCGGTGAGGACTTCGACAACCGTCTGGTCAACCACTTCG-TGACCGA 18866
Query 196018 GTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAG 196077
|||| || ||| | |||||||| |||| || || | ||||| ||||| || |
Sbjct 18865 GTTCAAGCGGAAGCACAAGAAAGACCTTTCCACCAACGCTCGTGCTCTCCGTCGTCTCCG 18806
Query 196078 GACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGAT 196137
|| || || || || ||||| || || || || || | || ||||| | || ||
Sbjct 18805 AACAGCTTGCGAGCGGGCCAAGCGTACCCTTTCATCATCCGCACAAACCTCAATCGAAAT 18746
Query 196138 TGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGA 196197
||| || | | || || || |||||||| || | || |||||||| ||||| || ||
Sbjct 18745 TGACTCCCTCTACGAAGGCATCGACTTCTACACCTCCATCACCCGTGCTCGTTTCGAGGA 18686
Query 196198 GTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGC 196257
| | | || | || | |||||| || ||||| | || || ||||||||
Sbjct 18685 GCTTTGCCAGGACCTCTTCCGCTCTACTATGGAGCCAGTTGAGCGTGTTCTCCGTGACGC 18626
Query 196258 AAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCC 196317
||||| || |||||| ||| |||| || ||| | || || || || || ||||| ||
Sbjct 18625 CAAGATCGACAAGTCTTCCGTTCATGAGATCGTCTTGGTCGGTGGTTCCACTCGTATCCC 18566
Query 196318 GAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAA 196377
||||| || || | |||| ||||||||| ||| || |||||| |||||||
Sbjct 18565 CAAGATCCAGAAGCTTGTTTCGGACTTCTTCAACGGTAAGGAGCCAAACAAGTCGATCAA 18506
Query 196378 CCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGA 196437
||| || || || || || || ||||| || |||||||| ||||||||||| || ||
Sbjct 18505 CCCCGACGAGGCTGTCGCATACGGTGCTGCAGTTCAGGCCGCTATTCTCTCCGG---CGA 18449
Query 196438 CAATAAT--AACGTCC----AAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGG 196491
|| | | | |||| | || | || || || ||||| | || | ||| | ||
Sbjct 18448 CACTTCTTCCAAGTCCACCAACGAAATCCTCCTTCTCGATGTCTCCCCATTGTCCGTCGG 18389
Query 196492 TCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGAC 196551
| | || || || |||||||| ||||| | || | | ||||| ||||| |||||
Sbjct 18388 TATCGAGACCGCTGGTGGTGTAATGACCGCCCTCATCAAGCGCAACACCACTATCCCGAC 18329
Query 196552 TAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGT 196611
|||||| | || || || || | ||||| || || |||||||| || |||||
Sbjct 18328 CAAGAAGTCCGAGGTTTTCTCCACTTTCTCCGACAACCAGCCAGGTGTGTTGATCCAAGT 18269
Query 196612 ATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGAC 196671
| || || || || ||||| | ||||| ||| | ||||| || | ||||| | ||
Sbjct 18268 CTTCGAGGGCGAGCGTGCCCGTACCAAGGACAACAACCTACTGGGCAAGTTCGAGCTCAC 18209
Query 196672 GGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGC 196731
|| |||||| | || || | |||||||| ||||| | || ||||||| | |||||
Sbjct 18208 TGGTATTCCACCCGCCCCGCGTGGTGTTCCTCAGATCGAGGTCACCTTCGATGTCGACGC 18149
Query 196732 AAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGT 196791
|| || || | |||||| | ||| || |||| | |||| || | | ||||| ||
Sbjct 18148 CAACGGTATCATGAACGTCTCCGCTCTCGAGAAGGGTACTGGAAAGACCAACAAGATCGT 18089
Query 196792 GATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851
|| ||||| |||||||| || || | ||||| || || || |||||| | || ||
Sbjct 18088 CATCACCAACGACAAGGGACGTCTAACGAAGGAAGACATCGAGCGTATGTTGGCTGAGGC 18029
Query 196852 GGAAAAGTACAGGGAAGAAGACGAGG 196877
|| ||||||| || || || ||||
Sbjct 18028 CGAGAAGTACAAGGCCGAGGATGAGG 18003
>seq3616
Length=361826
Score = 224 bits (248), Expect = 1e-53
Identities = 498/741 (67%), Gaps = 17/741 (2%)
Strand=Plus/Minus
Query 195701 GTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACA 195760
|| ||| | || || | ||||||||||||||||||| || ||||| ||||| |||
Sbjct 327901 GTCAAAAAGGCCGTCATTACTGTACCTGCTTACTTCAACGACAACCAACGTCAGGCAACA 327842
Query 195761 AAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCG 195820
|| ||||||| || ||||| | ||| | || | || ||||||||||| || ||
Sbjct 327841 AAAGACGCTGGCGCCATTGCTGATCTGCAAGTCCTCCGGATCATCAATGAACCCACCGCT 327782
Query 195821 GCTGCAATTGCTTATGGTCTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATC 195877
|| || ||||| || ||||||| |||| || | || |||||| | |||
Sbjct 327781 GCCGCGATTGCGTACGGTCTGGGATCCGGCAAGTCAGAGAAGGAGCGAAATGTTCTAATC 327722
Query 195878 TTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTC 195937
| ||||| ||||| || || |||||||| || |||||| | || | |||||| | ||
Sbjct 327721 TACGATCTTGGTGGAGGGACTTTTGATGTGTCTCTTCTCCACATCCAGGGTGGTGTTTTT 327662
Query 195938 GAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTT 195997
|| ||||| |||||||| ||||||||| | |||||| | || ||||| || ||
Sbjct 327661 ACCGTCAAGGCGACTGCTGGCGATACTCATTTGGGTGGTCAGGACTTCGACACAAACCTG 327602
Query 195998 CTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCT 196057
|| || || | || |||| || |||| |||||||| || || || | ||
Sbjct 327601 CTTGAGCACTTCAAGAAGGAATTCCAGCGCAAGACCAAGAAAGACATGTCGGGCGACCCA 327542
Query 196058 AGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACG 196117
| ||||| || || ||| |||| || ||||| ||||| || || || || || | | |
Sbjct 327541 CGTGCTCTGCGGCGTCTTCGGACGGCTTGTGAGCGTGCTAAGCGCACGCTATC--CAATG 327484
Query 196118 G--CTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTA 196175
| ||||||| | || || || || || | ||||| || |||||| | | |
Sbjct 327483 GTACTCAAACTACTGTCGAAATCGACTCCCTCTTTGATGGCGAAGACTTCAACGCTCAAA 327424
Query 196176 TTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTA--GGAAGTGTATGGAACC 196233
|||||||||| || ||||| || | ||| | | || | || | || || ||
Sbjct 327423 TTACCCGTGCTCGATTTGAGGACCTCAACGCCAAGGCCTTCAATGGCA--CAATCGACCC 327366
Query 196234 TGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCT 196293
||| | || || | || ||||| |||| ||| ||| || || |||||||| ||
Sbjct 327365 CGTTCAGCAGGTTATGAAAGATGCAAACTTGGACAAGAGTAAAGTGGACGAAATTGTACT 327306
Query 196294 TGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGC---TTCTTCAA 196350
|| || ||||| |||||||| || | ||| ||||| |||| |||| | |||| |
Sbjct 327305 CGTTGGTGGATCTACCCGTATCCCCAGGAT---ACAGAAGCTTCTTAGCGATTACTTCGA 327249
Query 196351 TAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGT 196410
|| | | | || | |||||||| || || || ||||| || ||||| || ||
Sbjct 327248 CGGGAAGAAGCTCGAGAAGAGCATCAACCCTGACGAGGCTGTTGCCTACGGTGCCGCTGT 327189
Query 196411 TCAGGCTGCTATTCTCTCAGG 196431
|||||||| ||| || || ||
Sbjct 327188 TCAGGCTGGTATCCTTTCCGG 327168
>seq3328
Length=87304
Score = 172 bits (190), Expect = 7e-38
Identities = 160/203 (79%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945
||||| || || |||||||| ||||| ||||| |||||||| ||||| || |||| ||
Sbjct 25104 ACTGGCAAGACCATCACCCTTGAGGTGGAGTCTTCAGACACCATCGACAATGTCAAGTCC 25163
Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005
|||||||| || |||||||||||||| || |||||||| || | || ||||| || |||
Sbjct 25164 AAGATTCAGGACAAGGAAGGCATTCCTCCGGATCAGCAGCGCTTGATCTTTGCCGGCAAA 25223
Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065
||||| ||||| || || ||||| | || || ||| | || |||||||| ||||| |||
Sbjct 25224 CAGCTCGAAGACGGCCGGACCCTATCGGACTATAACATCCAGAAGGAGTCCACTCTCCAC 25283
Query 172066 CTTGTTCTAAGGCTTCGGGGTGG 172088
| || ||| | |||||||| ||
Sbjct 25284 TTGGTCCTACGTCTTCGGGGAGG 25306
Score = 168 bits (186), Expect = 9e-37
Identities = 177/233 (76%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||| |||||||| || || ||||||||||| || |||||| | || ||||||
Sbjct 26041 GTGGTATGCAGATCTTTGTCAAGACTCTTACTGGAAAGACGATCACCTTGGAAGTTGAGA 26100
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
|| |||||||| |||||| |||| ||||||||| ||||| || || |||||||| |
Sbjct 26101 GCTCCGACACAATTGATAACGTCAAGAGCAAGATTCAGGATAAAGAGGGTATTCCACCAG 26160
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
| ||||| || | || |||||||| || ||||| || ||||| || || | | ||||
Sbjct 26161 ACCAGCAGCGCTTGATCTTTGCTGGAAAGCAGCTGGAGGATGGCCGGACTTTGTCGGATT 26220
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
||||| | || || ||| || || ||||| || || ||||| || || |||
Sbjct 26221 ACAACATCCAGAAAGAGAGCACCCTGCACCTGGTGCTTAGGCTCCGTGGCGGT 26273
Score = 167 bits (184), Expect = 3e-36
Identities = 179/236 (76%), Gaps = 2/236 (1%)
Strand=Plus/Plus
Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919
||||||||||||| || || || || ||||| || |||||||| |||||||| || ||||
Sbjct 25588 GTATGCAAATCTTCGTCAAGACGCTCACTGGCAAGACTATCACACTCGAGGTCGAATCGT 25647
Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979
||||||| || || || |||| | ||||| || ||||||||||| || ||||| || |
Sbjct 25648 CAGACACGATTGACAATGTCAAGTCGAAGATACAGGATAAGGAAGGTATCCCACCGGACC 25707
Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039
| || || || || || || || || || || || ||||| | || || | || ||||
Sbjct 25708 AACAGCGTCTCATCTTCGCAGGCAAGCAACTGGAGGATGGGAGGACACTTTCCGACTACA 25767
Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG--TGCAA 172093
|| |||| || |||||||| || |||||||| || | ||||| || || |||||
Sbjct 25768 ACATTCAGAAAGAGTCTACCCTCCACCTTGTCCTTCGTCTTCGTGGGGGAATGCAA 25823
Score = 145 bits (160), Expect = 1e-29
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||||||||| || || |||||||| ||||| || || || || || || || || |||
Sbjct 25818 ATGCAAATCTTCGTAAAGACCCTTACGGGAAAGACGATAACGCTGGAAGTCGAATCATCA 25877
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| || || ||| | || | ||||||||||| ||||| || || ||||| || |||
Sbjct 25878 GACACGATTGACAACGTTAAGTCAAAGATTCAAGACAAGGAGGGTATCCCACCAGACCAG 25937
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| || | || || || ||||| ||| | || || || || || || ||||||||||
Sbjct 25938 CAGCGGTTGATCTTCGCGGGTAAGCAGTTGGAGGACGGCCGGACACTGAGTGATTACAAC 25997
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
||||||||||| || | ||| | || || |||| || ||||||
Sbjct 25998 ATTCAAAAGGAGAGCACGTTGCACTTGGTCCTTCGGCTGCGCGGTGGT 26045
>seq3688
Length=146739
Score = 149 bits (164), Expect = 8e-31
Identities = 411/619 (66%), Gaps = 17/619 (3%)
Strand=Plus/Minus
Query 77945 GAGACACCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCATGGAAATGATATTCCA 78004
|||| |||||| || | | |||||||| || |||| || ||| |||| | | |
Sbjct 23740 GAGAGGCCTCAACACATGATAATGCGTGTCGCTGTTGGCATCTGGGGAGATGACGT-CGA 23682
Query 78005 GC-GGTACTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTATTCACGCAACACCTA 78062
| ||| ||||| || ||| || ||||| ||| ||| || | ||||| | || |
Sbjct 23681 GAAGGTCCTTGAGACCTATAATCTTATGTCTCAAAAATAT-TTCACCCACGCCTCCCCAA 23623
Query 78063 CTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATA 78122
|| | || || || |||||||| | |||||| || |||| || ||||| ||| | |
Sbjct 23622 CTCTCTTCAACGCTGGTACTCCACAACCACAGTTGGCATCGTGCTTCCTCGTTGACATGA 23563
Query 78123 AGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGAG-TGTGCTCAGATTTCTAAG 78181
| |||||| ||| | ||||| |||| || | | ||| || |||| ||| || |||
Sbjct 23562 AAGAGGACAGCATTGAAGGTATCTACGACACCTTGA-AGACCTGCGCTCTGATCTCGAAG 23504
Query 78182 TGGGCTGGTGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAAGTCCAGGATTAGA 78241
||| || || || || || | ||||| | | || || | | ||| |||
Sbjct 23503 ACGGCGGGAGGCATTGGGCTGAACATTCATCGTATCCGAGCCACCGGGTCGTACATTGCC 23444
Query 78242 GGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTCAATGCTACAGCA 78301
|| || || || || | || ||| | |||||||| | || ||||| || ||
Sbjct 23443 GGCACAAACGGGTCCTCGAACGGGATTGTGCCTATGCTCCGTGTCTTCAACAACACCGCG 23384
Query 78302 CGCTATGTCAACCAAGCGGGTCGTAGGAAGGGGTCA------TTCGCTATGTACCTTGAA 78355
| |||||| |||||| || ||| ||| || || || ||||| ||||||||
Sbjct 23383 AGATATGTCGACCAAG---GTGGTAACAAGCGGCCAGGTGCGTTTGCTATTTACCTTGAG 23327
Query 78356 CCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAA 78415
||||||||||||||||| | || |||||||| | || || || || | ||||||
Sbjct 23326 CCTTGGCACGCCGATGTCTTCGAGTTTTTGGACTTGCGCAAGAATCACGGGAAGGAGGAA 23267
Query 78416 GCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGTT 78475
| || | ||| ||||| ||| | |||| || ||||||||||||||| | ||
Sbjct 23266 GTCCGCGCGCGCGATCTATTCTTGGCTCTTTGGACCCCCGATCTTTTTATGAAGCGTGTC 23207
Query 78476 GAGGAAGGA-GGTAAATGGTCTCTTTTCTGTCCAGATAAGACTAAGGGTCTTTCAGATGT 78534
|| |||| | || ||||| | || |||||||| | | || ||||| | |||||
Sbjct 23206 GA-GAAGAACGGCGAATGGACACTCTTCTGTCCCAACGAAGCTCCAGGTCTGGCTGATGT 23148
Query 78535 ATACGGGGAAGAATTCGAA 78553
||||| || ||||| |||
Sbjct 23147 GTACGGAGACGAATTTGAA 23129
>seq1402
Length=304299
Score = 116 bits (128), Expect = 5e-21
Identities = 244/363 (67%), Gaps = 3/363 (1%)
Strand=Plus/Plus
Query 195626 TTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCT 195685
||| | || |||||| |||| | ||||| | ||||||||||||| || ||
Sbjct 236832 TTTACGCCTGAAGAAGTTTCCGCCATGGTCCTTGGGAAGATGAAGGAGATCGCCGAGAGC 236891
Query 195686 TTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCA 195745
| | | || || | || | | || ||||| || || || || ||||||| ||
Sbjct 236892 TACCTAGGGAAGAAGGTAGATCACGCCGTTGTCACCGTCCCAGCATACTTCAACGACAAC 236951
Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805
|| | || || ||||||||||||| | ||||| ||| | ||| ||| | | ||
Sbjct 236952 CAGAGGCAAGCTACAAAGGACGCTGGCGTCATTGCTGGTTTGAACGTTCTCCGCGTCGTC 237011
Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAA 195865
|| || || || ||||| || || || || |||||||||||| |||| ||||||
Sbjct 237012 AACGAGCCCACCGCGGCCGCGATCGCATACGGTCTGGACAAG---AAGGGCGAAGAGCGC 237068
Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925
| | | | | |||| | || || || || || |||||||| || ||| |||||
Sbjct 237069 CAGATCATCGTGTATGATTTGGGCGGAGGAACCTTCGATGTCTCCCTCCTCTCCATTGAC 237128
Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985
|||| | ||||| || | ||| || ||||||||||| || | || || || ||||||
Sbjct 237129 AATGGTGTGTTCGAGGTCATGGCAACAGCTGGTGATACCCACTTGGGAGGAGAGGATTTC 237188
Query 195986 GAT 195988
|||
Sbjct 237189 GAT 237191
>seq256
Length=121632
Score = 116 bits (128), Expect = 5e-21
Identities = 135/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 171870 CTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAAT 171929
||| || || || || || || || || |||||||||||||| || ||| ||||| ||
Sbjct 86588 CTTCGTCAAGACTCTGACGGGTAAGACCATCACCCTCGAGGTCGAATCGAGCGACACCAT 86647
Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989
||| || |||| ||||||| || || ||||||||||| ||||| || |||||||| |
Sbjct 86648 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCACCGGACCAGCAACGGTT 86707
Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049
|| || || || || ||| | || ||||| || || || | || |||||| | || ||
Sbjct 86708 GATCTTCGCAGGCAAGCAGTTGGAGGATGGCCGCACACTTTCCGACTACAACATCCAGAA 86767
Query 172050 GG 172051
||
Sbjct 86768 GG 86769
>seq1350
Length=581194
Score = 91.5 bits (100), Expect = 2e-13
Identities = 103/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 171954 AGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGA 172013
||| ||||||||||| ||||| || || || || || || || || || || || || ||
Sbjct 376019 AGACAAGGAAGGCATCCCACCGGACCAACAGCGCCTCATCTTCGCCGGCAAGCAACTCGA 375960
Query 172014 AGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073
||| || || |||||| | || ||||| | || |||||||| || || ||||| || ||
Sbjct 375959 AGACGGCCGCACCCTCTCCGACTACAATATCCAGAAGGAGTCCACCCTCCACCTGGTGCT 375900
Query 172074 AAGGCTTCGGGGTGGTGC 172091
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Sbjct 375899 GCGGCTGCGCGGTGGAGC 375882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657830403217520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |