Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F900169345.1_202017-04-14]
3,891 sequences; 39,229,750 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq2166 91.5 3e-13
seq1688 87.8 4e-12
>seq2166
Length=40481
Score = 91.5 bits (100), Expect = 3e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 318995 TGTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGAT 319054
|||| || || || ||||| ||||| || || | |||||| ||| |||| || || |
Sbjct 33096 TGTCCTCGCCAGATGCATACCGCCACGCAATGTAGTCGTTGGGGGTCTTGTCCAGGTGCT 33155
Query 319055 CCTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCC 319114
||| ||||||||||| || ||||| ||||| || || | ||||| || || |||||||
Sbjct 33156 GCTCAATGTGGTGGAAGGCGTGCTGGGCCACATAGGCTACACGCAGGTTGGGGTGCTTCC 33215
Query 319115 AAACACTACCGATGGTGGCTTCCATTTGTCCCGTGAGCACCTTAATGAGGGTGCTTTTCC 319174
| ||| | || | | |||| | || ||||||| ||| || | |||| || |
Sbjct 33216 ACACAGTGCCCTCTGCAGTCTCCAGCTCCCCAGTGAGCAGCTTGATCATGGTGGACTTAC 33275
Query 319175 CCGCACCGTT 319184
| || |||||
Sbjct 33276 CAGCTCCGTT 33285
>seq1688
Length=109735
Score = 87.8 bits (96), Expect = 4e-12
Identities = 131/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 230452 GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTT 230511
|| |||||||| | | ||| || || |||||||| || ||||| || || | |
Sbjct 95514 GGTATGAACGCCGCTTTGATGAAGCAATATATCGAATTTGTGGCCGATCGTCTTCTCCTA 95573
Query 230512 GCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATT 230571
|| || || || |||| |||||||| |||||| || | || |||||| ||
Sbjct 95574 GCTCTAGGCAACCAGAAGTACTACAACTCGTCGAACCCGTTCGACTTCATGGAGTCGATA 95633
Query 230572 TCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGT 230631
|| | || ||||||||||||||||| |||||||| |||||||||||| | | |||
Sbjct 95634 TCATTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTATCAGAAGGCCGGT 95693
Query 230632 GTGATG 230637
|| |||
Sbjct 95694 GTTATG 95699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057771263837330
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |