Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F900169345.1_202017-04-14] 3,891 sequences; 39,229,750 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1688 95.1 1e-14 >seq1688 Length=109735 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 ||||| || |||||||| ||| ||| | |||||||| ||||||||||| |||||| Sbjct 95072 ATATAAGTGTCGATGAGAAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGA 95013 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| |||||||| || || | ||| |||||||| | ||| || || | || Sbjct 95012 AAACCGTAGAAGCATCGTGCCTCAGGTATCTGAACTTCGCCACTGAAGCGCTCAACGAGG 94953 Query 17354 TTTTCGTTCACGATGCCGTC 17373 || ||||| ||||| || || Sbjct 94952 TTCTCGTTGACGATACCATC 94933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517520427875880