Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F900169345.1_202017-04-14] 3,891 sequences; 39,229,750 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1688 82.4 8e-11 >seq1688 Length=109735 Score = 82.4 bits (90), Expect = 8e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561 || ||||| |||||||| || |||||||| || ||||||||||| ||||| | ||| Sbjct 95042 TCGGAGTGGATGTTCTCCATCATGATCTGAAAACCGTAGAAGCATCGTGCCTCAGGTATC 94983 Query 16562 TGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCA 16621 || ||||| | || || || | |||||||| || |||||||| || ||||||| Sbjct 94982 TGAACTTCGCCACTGAAGCGCTCAACGAGGTTCTCGTTGACGATACCATCTGATGCAGCA 94923 Query 16622 AAAAACGC 16629 || || || Sbjct 94922 AAGAAGGC 94915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511389526082120