Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F900169345.1_202017-04-14]
3,891 sequences; 39,229,750 total letters
Query= NC_003278.1
Length=35580
Score E
Sequences producing significant alignments: (Bits) Value
seq2501 120 7e-23
>seq2501
Length=689
Score = 120 bits (132), Expect = 7e-23
Identities = 174/243 (72%), Gaps = 2/243 (1%)
Strand=Plus/Plus
Query 33117 ACCTGGCACAGGCCGTTTACCACCCTGGAACTCGCCGCGCTGCAGAGCTTGGTCGACCCC 33176
|| |||||| |||| || ||||| ||||| ||||| ||||| || | || |||||
Sbjct 172 ACGTGGCACCGGCCTTTCACCACGTACGAACTGGCCGCTTTGCAGGGCCTCGTGGACCCA 231
Query 33177 GAAGAGCAGTTGGTCCTCGACGGCCTGAGCGACAGCG-ACTGGCGCGAGCGGATCGGCAA 33235
|| || ||| | | |||||||||||| ||| ||| | ||||||||||| ||||||||
Sbjct 232 GAGGAACAGCTTGAACTCGACGGCCTGTCCGA-TGCGAATTGGCGCGAGCGCATCGGCAA 290
Query 33236 TGCGGTTCCGCCGGCTGCGGCCGAGGCCATCGCCGGCGTGATGGGCACCACCCTGTTGTT 33295
||||||||||| | ||||| ||| || |||| | ||||| | || ||| || |
Sbjct 291 CGCGGTTCCGCCCGACGCGGCGACGGCGATTGCCGACACGATGGCAAAGACGCTGCTGCT 350
Query 33296 GGCTGAGGCTGGCGAGACCTTCCTGCTCAGTAGCACGCCGATCTGGGTGCGTCAGGTCGC 33355
|| | | ||||||| |||| |||| | |||||||||||| || | ||| |
Sbjct 351 CGCGTGGTCCGGCGAGAGCTTCATGCTTTCCGCCCTGCCGATCTGGGTTCGGCCGGTGGG 410
Query 33356 CGT 33358
|||
Sbjct 411 CGT 413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 113729144830964
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |