Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F900169345.1_202017-04-14] 3,891 sequences; 39,229,750 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq3645 84.2 2e-11 >seq3645 Length=87304 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 142994 TCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAG 143053 || ||||| ||||||||||| |||| ||| | ||| || | || ||||| || || Sbjct 26008 TCCTTTTGAATGTTGTAATCACTCAGTGTCCGGCCGTCCTCCAACTGCTTACCCGCGAAG 25949 Query 143054 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGT 143113 |||| || ||||| || || || || || || ||||| ||| ||| || | | Sbjct 25948 ATCAACCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGAATCTTTGACTTAACGTTG 25889 Query 143114 TCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACG 143173 || | |||||| | | ||| ||||| | || | |||||| || || | || |||||| Sbjct 25888 TCAATCGTGTCTGATGATTCGACTTCCAGCGTTATCGTCTTTCCCGTAAGGGTCTTTACG 25829 Query 143174 AATATTTGCAT 143184 || |||||||| Sbjct 25828 AAGATTTGCAT 25818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506989740087120