Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F900169345.1_202017-04-14]
3,891 sequences; 39,229,750 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq98 86.0 4e-12
seq3658 84.2 1e-11
>seq98
Length=790089
Score = 86.0 bits (94), Expect = 4e-12
Identities = 118/165 (72%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 25737 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 25796
||||||||| ||||| ||| | || |||| | || ||| |||||| || |||||
Sbjct 519942 CAGCTGATCGACCCCTTGCCCAGTATAATCTGTCTTCGCATCCACGTACTCCGCACCGAA 519883
Query 25797 ATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCC 25856
|| || ||||||||||||||| || || |||||||| || | || | || || |||
Sbjct 519882 ATGCCGCCACTGGAACCCGTAGACAGGACCTAGGTCGCCCACATCTCGATGAGAAAGGCC 519823
Query 25857 CCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTT 25901
|||| | || || | || |||||| |||||||||||||
Sbjct 519822 GACACTATCAAGGAACTCACGCGAGCCATTGCCGTCCCAGATCTT 519778
>seq3658
Length=116049
Score = 84.2 bits (92), Expect = 1e-11
Identities = 131/181 (72%), Gaps = 6/181 (3%)
Strand=Plus/Plus
Query 44367 TCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCGTCGT 44426
||||||| |||||| || | || ||| | || |||| |||||||| || ||||||
Sbjct 9856 TCGTCAAAGTGAGGATGCGAACGACCAAGATTCCTCAGATCGGCGACAAATTCGCGTCGC 9915
Query 44427 T-CACGGCGCAAAAGGGGAC-ATGCGGAGC-CGTCCTGACCCAGGAGGACATGCCCTTCG 44483
|||||| || || || || || ||| | | | | || || || ||||||||||||
Sbjct 9916 GGCACGGC-CAGAAAGGTACTATTGGGATCACTTACCGATCC--GAAGACATGCCCTTCA 9972
Query 44484 ACAAAAACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGA 44543
|| | || |||||||| || ||||||||||| || |||||| |||| || | ||||
Sbjct 9973 CCAGCGAAGGTGTGGTGCCAGATCTCATCATCAATCCGCACGCCATTCCGTCTCGCATGA 10032
Query 44544 C 44544
|
Sbjct 10033 C 10033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340121470143543
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |