Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F900169345.1_202017-04-14] 3,891 sequences; 39,229,750 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq3645 86.0 5e-12 >seq3645 Length=87304 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| ||||||| || | || || || | ||||||||||||||||||||||||||| Sbjct 26045 ACCACCGCGCAGCCGAAGGACCAAGTGCAACGTGCTCTCCTTTTGAATGTTGTAATCACT 25986 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || | || ||||||||| ||||||||| || | || || |||||||| || || Sbjct 25985 CAGTGTCCGGCCGTCCTCCAACTGCTTACCCGCGAAGATCAACCGCTGCTGGTCTGGTGG 25926 Query 48619 CACACTTTCCTTGTC 48633 | || |||||||| Sbjct 25925 GATACCCTCCTTGTC 25911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421231223609891