Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F900169345.1_202017-04-14]
3,891 sequences; 39,229,750 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq3190 147 2e-30
>seq3190
Length=146739
Score = 147 bits (162), Expect = 2e-30
Identities = 328/488 (67%), Gaps = 6/488 (1%)
Strand=Plus/Minus
Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT- 93950
||| |||| || || |||||||| || || || |||||| || | ||||| |||||
Sbjct 23632 GCCTCCCCAACTCTCTTCAACGCTGGTACTCCACAACCACAGTTGGCATCGTGCTTCCTC 23573
Query 93951 GATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010
| |||| | || | ||| ||| || || | ||||| | | ||| ||| ||
Sbjct 23572 GTTGAC-ATGAAAGAGGACAGCATTGAAGGTATCTACGACACCTTGAAGACCTGCGCTCT 23514
Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGT 94068
||||| || ||||| || || ||| | | | || |||| || |||| ||
Sbjct 23513 GATCTCGAAGACGGCGGGAGGCATTGGGCTGAACATTCAT--CGTATCCGAGCCACCGGG 23456
Query 94069 TCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTC 94128
|| ||||| ||| || || || |||| ||||| | || ||||||||||| ||||||
Sbjct 23455 TCGTACATTGCCGGCACAAACGGGTCCTCGAACGGGATTGTGCCTATGCTCCGTGTCTTC 23396
Query 94129 AACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTC 94188
|||||| | ||| | || || ||||| |||||| | | || ||| | || || |
Sbjct 23395 AACAACACCGCGAGATATGTCGACCAAGGTGGTAACAAGCGGCCAGGTGCGTTTGCTATT 23336
Query 94189 TATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGC 94248
|| || ||||| |||||||| || || | || | ||| |||| ||||| |||||
Sbjct 23335 TACCTTGAGCCTTGGCACGCCGATGTCTTCGAGTTTTTGGACTTGCGCAAGAATCACGGG 23276
Query 94249 AACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308
|| || | | || | || || |||| ||||| ||| || || |||||||||
Sbjct 23275 AAGGAGGAAGTCCGCGCGCGCGATCTATTCTTGGCTCTTTGGACCCCCGATCTTTTTATG 23216
Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTG 94368
|| || |||||||| ||| || |||| || || |||||||| ||| ||| || |||
Sbjct 23215 AAGCGTGTCGAGAAGAACGGCGAATGGACACTCTTCTGTCCCAACGAAGCTCCAGGTCTG 23156
Query 94369 TCCGACGT 94376
| || ||
Sbjct 23155 GCTGATGT 23148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494699137900360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |