Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F900169345.1_202017-04-14]
3,891 sequences; 39,229,750 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq77 100 2e-15
>seq77
Length=51578
Score = 100 bits (110), Expect = 2e-15
Identities = 154/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 474657 CACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCATATC 474716
|||| ||| | || || |||||||| ||| | || |||| | || || || || |
Sbjct 19253 CACCAGAAGAGATCTCCTCAATGGTCTTAACAAAGATGAGGGAGACTGCCGAATCGTACC 19194
Query 474717 TTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAAC 474776
| ||| ||| | |||| || | || || || || ||||| || || |||||||
Sbjct 19193 TGGGAGGGACAGTCAACAATGCCGTGGTGACAGTCCCCGCCTATTTCAACGACTCTCAAC 19134
Query 474777 GTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATG 474836
|||||||||| |||||||| || || || ||||| || ||| ||||||| || || |
Sbjct 19133 GTCAAGCAACAAAAGATGCCGGTCTCATCGCTGGTCTCAACGTTCTACGTATCATCAACG 19074
Query 474837 AACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876
|||| || || || || | || || ||||| || |||||
Sbjct 19073 AACCCACTGCCGCTGCCATCGCCTACGGTCTCGACAAGAA 19034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268012296130868
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |