Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F900169345.1_202017-04-14]
3,891 sequences; 39,229,750 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq98 93.3 4e-14
>seq98
Length=790089
Score = 93.3 bits (102), Expect = 4e-14
Identities = 202/295 (68%), Gaps = 8/295 (3%)
Strand=Plus/Plus
Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAG--CGGGGGTTCCCATCTC 34385
||||||||||||| | || || || || || || || | ||| ||| ||||
Sbjct 519778 AAGATCTGGGACGGCAATGGCTCGCGTGAGTTCCTTGATAGTGTCGGCCTTTCTCATC-- 519835
Query 34386 GGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGT 34445
| || | ||||||| | || || |||||||||||||||||| | || || || |||||||
Sbjct 519836 GAGATGTGGGCGACCTAGGTCCTGTCTACGGGTTCCAGTGGCGGCATTTCGGTGCGGAGT 519895
Query 34446 ATCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATC 34504
| || || |||||| | || ||| | || || || | || |||||| | | || ||
Sbjct 519896 A-CGTGGATGCGAAGACAGATTATACTGGGCAAGGGGTCGATCAGCTGGCGGAGGTTATT 519954
Query 34505 GACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAG 34564
|||| ||||| || || |||| | || ||| | | |||| |||||||| |
Sbjct 519955 GACAAGCTGAAGAACAAGCCGTATGATCGGAGAATCATCCTCAGCGCTTGGAACCCAGCG 520014
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGTC 34618
|| || |||||| | || ||||| |||| | ||| ||||||||||||
Sbjct 520015 GACCTAAAGAAGATGGCATTGCCACCGTGTCACA-TGTTTGCACAATTCTACGTC 520068
Score = 93.3 bits (102), Expect = 4e-14
Identities = 202/295 (68%), Gaps = 8/295 (3%)
Strand=Plus/Minus
Query 6727 GACGTAGAATTG-GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCG 6785
|||||||||||| ||| | |||| ||||| || | |||||| || ||| |
Sbjct 520068 GACGTAGAATTGTGCAAACA-TGTGACACGGTGGCAATGCCATCTTCTTTAGGTCCGCTG 520010
Query 6786 GGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCA 6845
||||||| |||| | | ||| || | |||| || || ||||| |||| || |
Sbjct 520009 GGTTCCAAGCGCTGAGGATGATTCTCCGATCATACGGCTTGTTCTTCAGCTTGTCAATAA 519950
Query 6846 CGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCC 6904
| | | |||||| || | || || || | ||| || | |||||| || || ||||||
Sbjct 519949 CCTCCGCCAGCTGATCGACCCCTTGCCCAGTATAATCTGTCTTCGCATCCACG-TACTCC 519891
Query 6905 GCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGAT 6964
|| || || || | |||||||||||||||||| || || | ||||||| | || | |||
Sbjct 519890 GCACCGAAATGCCGCCACTGGAACCCGTAGACAGGACCTAGGTCGCCCACATCTC--GAT 519833
Query 6965 GGGAACCCCCG--CTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017
| ||| ||| | || || || || || || || | |||||||||||||
Sbjct 519832 GAGAAAGGCCGACACTATCAAGGAACTCACGCGAGCCATTGCCGTCCCAGATCTT 519778
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448240597637520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |