Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000687475.1_202014-05-09] 449 sequences; 39,397,682 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 >seq1 Length=2302571 Score = 95.1 bits (104), Expect = 1e-14 Identities = 158/226 (70%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 104592 GTATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCAT 104651 |||||| || ||||| || |||||||| || |||||||| |||| || ||||| | ||| Sbjct 1625251 GTATTCACCAACTCGCTTCTCAAAAAAGTTGGTCTTGCCACCCAGGGAGATATTCTCCAT 1625192 Query 104652 AAATTCGAAAGGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCG 104711 ||| || || |||||| ||||| | ||||| | || || | | |||||| || Sbjct 1625191 AAAATCAAACGGATTCGCTGTCTTGTACACCTTTTCATTCCCGAGAGCAACCAACAGGCG 1625132 Query 104712 ATCCGCCACAAATTCGATGTACTCGCACATAGAATGTGCA-TTCATGCCCAGCATTGCGA 104770 || || || ||||||||||| | ||| | |||| | |||||||| || | ||| Sbjct 1625131 GTCGGCAACGAATTCGATGTATTGCTTCAT-CAGTGTGGAGTTCATGCCGAGAAGAGCGC 1625073 Query 104771 CGGGTAAAGCGTTAGTaaaaaaaTCTTTCTCGATGTCCACGGCTTC 104816 || | ||| | || | ||||||| ||| ||| ||||| || Sbjct 1625072 ACGGCAGAGCCTCCGTCAGGAAATCTTGCTCAATGGTGACGGCATC 1625027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429933647309595