Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000687475.1_202014-05-09]
449 sequences; 39,397,682 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 1e-14
>seq1
Length=2302571
Score = 95.1 bits (104), Expect = 1e-14
Identities = 158/226 (70%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 104592 GTATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCAT 104651
|||||| || ||||| || |||||||| || |||||||| |||| || ||||| | |||
Sbjct 1625251 GTATTCACCAACTCGCTTCTCAAAAAAGTTGGTCTTGCCACCCAGGGAGATATTCTCCAT 1625192
Query 104652 AAATTCGAAAGGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCG 104711
||| || || |||||| ||||| | ||||| | || || | | |||||| ||
Sbjct 1625191 AAAATCAAACGGATTCGCTGTCTTGTACACCTTTTCATTCCCGAGAGCAACCAACAGGCG 1625132
Query 104712 ATCCGCCACAAATTCGATGTACTCGCACATAGAATGTGCA-TTCATGCCCAGCATTGCGA 104770
|| || || ||||||||||| | ||| | |||| | |||||||| || | |||
Sbjct 1625131 GTCGGCAACGAATTCGATGTATTGCTTCAT-CAGTGTGGAGTTCATGCCGAGAAGAGCGC 1625073
Query 104771 CGGGTAAAGCGTTAGTaaaaaaaTCTTTCTCGATGTCCACGGCTTC 104816
|| | ||| | || | ||||||| ||| ||| ||||| ||
Sbjct 1625072 ACGGCAGAGCCTCCGTCAGGAAATCTTGCTCAATGGTGACGGCATC 1625027
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429933647309595
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |