Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000687475.1_202014-05-09]
449 sequences; 39,397,682 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq1 89.7 1e-12
>seq1
Length=2302571
Score = 89.7 bits (98), Expect = 1e-12
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 243544 GACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAA 243603
|| ||| | || ||| ||| | ||||||||||| ||| ||| || |||||||||
Sbjct 1625060 GAGGCTCTGCCGTGCGCTCTTCTCGGCATGAACTCCACACTGATGAAGCAATACATCGAA 1625119
Query 243604 TTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAAC 243663
||||| ||||||||| | || | || || || |||| || |||||||| | |||
Sbjct 1625120 TTCGTTGCCGACCGCCTGTTGGTTGCTCTCGGGAATGAAAAGGTGTACAAGACAGCGAAT 1625179
Query 243664 CCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGT 243723
|| |||| ||||||||| || || || || || || ||||| || || |||||
Sbjct 1625180 CCGTTTGATTTTATGGAGAATATCTCCCTGGGTGGCAAGACCAACTTTTTTGAGAAGCGA 1625239
Query 243724 GTCAGTGATTATCA-ACGCCCTGGTGTGATG 243753
|| |||| || || | | || ||||| |||
Sbjct 1625240 GTTGGTGAATACCAGAAGGCC-GGTGTCATG 1625269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102873655338150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |