Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000687475.1_202014-05-09]
449 sequences; 39,397,682 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq2 205 1e-47
seq36 93.3 5e-14
seq1 93.3 5e-14
>seq2
Length=1075658
Score = 205 bits (226), Expect = 1e-47
Identities = 1009/1583 (64%), Gaps = 35/1583 (2%)
Strand=Plus/Minus
Query 111526 AGAGAGACTACGACTTTGGTTATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCAAA 111585
||||||||| | ||| | || |||||| ||||||| || ||| | || |||| |
Sbjct 442596 AGAGAGACTTCAACTATCAGTACTTTGGTTTCAAGACGCTGGAGCGATCGTATCTCCTGA 442537
Query 111586 GACTGGATGGTGTCTTGATGGAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTA 111645
||||| || | | ||| || ||| ||||| ||||||| || || |||| |
Sbjct 442536 AGCTGGACGGCAAGATTGTCGAACGACCTCAGCACATGATCATGCGTGTTGCTGTCGGCA 442477
Query 111646 TCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGT 111705
|| || || | ||||| || |||| || ||| || |||||| || | |
Sbjct 442476 TCTGGGGAGACAACATTGAGCGCGTCCTGGAAACCTACAACCTCATGTCCAGTAAATTCT 442417
Query 111706 TCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTT 111765
||| |||||| |||| |||||||||||||| || || || || | ||| |
Sbjct 442416 TCACCCACGCCTCACCTACCCTCTTCAACGCGGGCACGCCTCAGTGTCAGCTTTCCTCGT 442357
Query 111766 GTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAAT 111825
| ||||| | | | ||||| || ||| | ||||| |||| |||||||| |
Sbjct 442356 GCTTCCTCGTCGACATGAAGGAAGACAGCATCGAGGGCATCTACGACACTCTCAAGACTT 442297
Query 111826 GTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCA 111885
| ||| || || || ||| || |||||||| || || |||| | | || |
Sbjct 442296 GCGCCATGATTTCTAAAATGGCCGGCGGTATCGGCCTGAACGTCCACCGCATTCGTGCTA 442237
Query 111886 ACAAGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCG 111945
| || ||| || || || || || | || | |||| ||||| || |
Sbjct 442236 CCGGATCCTACATTGCCGGCACCAACGGCACCTCGAACGGCGTCGTTCCCATGCTGCGAG 442177
Query 111946 TATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTC--GCAA--GGGATCTATC 112001
| || ||| ||| || | || || |||||| || | | || | ||| | ||
Sbjct 442176 TCTTCAACAACACTGCCAGATACGTCGACCAAGGCGG-CAACAAGCGACCGGGCGCCTTC 442118
Query 112002 GCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAAC 112061
|| |||| || ||||| |||||||| ||| || | || |||||||| | | |||
Sbjct 442117 GCCATCTACCTGGAGCCCTGGCACGCCGATGTCTTTGAATTCCTTGATCTCAGAAAGAAC 442058
Query 112062 CAAGGTGATGAGGAGG--CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATC 112119
|| || | ||||| | |||| | ||||| |||||| || || ||||| || || |
Sbjct 442057 CACGGCAAGGAGGAAGTCCGCGCT--CGCGACCTCTTCCTTGCGCTGTGGATCCCCGACC 442000
Query 112120 TCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCA 112178
||||||||||| | || ||| ||| |||| | ||| | ||| | || || || || ||
Sbjct 441999 TCTTCATGAAGCGTGTCGAGAAGAATGGCGACTGGACCCTCATGTGCCCCAACGAATGC- 441941
Query 112179 CCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAA 112238
|| || ||| |||| | || || |||||||| || | || ||||||||||
Sbjct 441940 CCTGGGCTCGCCGACTGCTACGGCGACGAGTTTGAGGCTTTGTATGAAAAGTACGAGCGC 441881
Query 112239 GAAAGTCG-GGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGT 112296
||| | || ||| | ||| | | || | || | ||||| | | || ||| ||
Sbjct 441880 GAAGGCCGTGGCCGC-AAGACAATCCGCGC-CCAGAAGCTGTGGTACTCGATCCTCGAGG 441823
Query 112297 CTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTA 112356
|||| ||||||||||| | || | |||||| ||||| || || ||| ||||| |
Sbjct 441822 CTCAGACCGAGACTGGCAACCCCTTTATGCTGTACAAGGATCATTGCAACAGGAAGAGCA 441763
Query 112357 ATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTA 112416
| || ||||| ||||| || || ||||||||||| || || || | || |
Sbjct 441762 ACCAGAAGAACTTGGGAACCATTCGCAGCTCCAACCTCTGCACCGAGATTATCGAGTACT 441703
Query 112417 CAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGG 112476
| | | || ||| || || || ||||| || || | || || ||| | |||||
Sbjct 441702 CGGCCCCCGACGAGGTTGCCGTCTGCAACCTTGCCTCCCTTGCCCTGCCCGCCTTTGTGG 441643
Query 112477 ATCCAGAGACAAAGACA--TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCAC 112534
| | ||| ||| || | || | |||| || ||||| || || ||
Sbjct 441642 A--CTACGACCAAGGCAAGTACGACTTCCAAAAGCTGCACGACGTCACCCGCGTGGTTGT 441585
Query 112535 AAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATC 112594
||| || |||| | || || || |||||||| | || || ||
Sbjct 441584 CCGAAATCTCAACAAGATCATCGACGTCAACCACTACCCCGTCCAAGAAGCACGCAACAG 441525
Query 112595 TAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCT 112654
|| ||| | || ||||| |||||| ||||||| ||||| | || || | ||| ||
Sbjct 441524 CAACATGCGGCATCGTCCCATTGGTGTCGGTGTTCAAGGCTTGGCCGACGCCTTCCTTGC 441465
Query 112655 TTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGAC 112714
|||| | ||||| || ||| || || | || || || ||||||||
Sbjct 441464 GCTTCGCATGCCCTTTGAGTCTCCCGAGGCTCGCGAGCTGAACAAGCAGATTTTTGAGAC 441405
Query 112715 AATGTATCACGCCGCTCTTGA-GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATG 112773
|| || |||||||| ||||| |||| |||| |||| ||| || ||||| ||
Sbjct 441404 CATCTACCACGCCGC-CTTGACGGCGTCGGTGGAGCTGGCCAAGGAGGAGGGTCCCTACT 441346
Query 112774 AAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTG 112833
|| || |||| ||||| || || |||| | || || ||||| |||| |||| |||
Sbjct 441345 CCACGTTCAAGGGATCTCCGGCCTCTGAAGGCATCCTGCAGTTTGACATGT-GGAACGTG 441287
Query 112834 A----GACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGT 112889
| | || | ||| | || ||||| | |||||||| | ||||||||| | ||
Sbjct 441286 ACGCCGTCCGA-CTT--GTGGGAGTGGGATTCCCTCAAGGAGCAGATCAAGGAGCACGGG 441230
Query 112890 CTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGT 112949
|||| ||| || || | || || ||||| || || ||||| | || || ||||
Sbjct 441229 ATTCGCAACTCGCTGCTGCTCGCGCCCATGCCCACGGCGTCCACGTCGCAGATTCTGGGC 441170
Query 112950 AATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGA 113009
|| || || ||||| || ||||||||| | ||||| || | | || | ||| |||||
Sbjct 441169 AACAACGAGTGCTTCGAGCCCTACACGTCCAACATTTACCAGCGACGCGTCCTGGCGGGC 441110
Query 113010 GAGTTTGTGATTGTCAAC---AAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGG 113066
||||| | | |||||| || |||| |||| ||| || || ||||| |||
Sbjct 441109 GAGTTCCAGGTCGTCAACCCATGGCTTCTCAAGGAT---CTCGTCGACATGGGTCTGTGG 441053
Query 113067 TCCAAGGATATGAAGGATCTCAT 113089
|| | | |||||| ||| |||
Sbjct 441052 TCAGACGCCATGAAGAATCGCAT 441030
>seq36
Length=363581
Score = 93.3 bits (102), Expect = 5e-14
Identities = 160/228 (70%), Gaps = 6/228 (3%)
Strand=Plus/Plus
Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123
||| || || || || ||||||| ||||||||| ||||| ||| | | |||| ||
Sbjct 175965 GGCGTCGATTTCGTCGATGAAGATGATGCATGGAGCATTTTTGCGGCCCTCGGCAAACAG 176024
Query 16124 ATCCCGTACACGCTTGGCG--CCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA- 16180
|| | || | ||| || || ||||| |||||||| ||||| || | || ||
Sbjct 176025 GTCTCTGACTC--TTGACGGACCAACACCGACAAACATTTCCACGAATTCTGATCCGCTC 176082
Query 16181 ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 16240
|| || | ||| || || || || || ||| ||||| |||||||| ||||| ||
Sbjct 176083 ACGCTGAA-GAACGGTACGCCGGACTCGCCAGCAGTGGCTTTTGCGAGAAGCGTCTTTCC 176141
Query 16241 CGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288
|||||||| ||| ||||||| ||| || || || |||||||||||
Sbjct 176142 AGTACCTGGAGGACCAGCGAGGATGGCGCCGCGGGGTATCTTGGCGCC 176189
>seq1
Length=2302571
Score = 93.3 bits (102), Expect = 5e-14
Identities = 100/130 (77%), Gaps = 2/130 (2%)
Strand=Plus/Plus
Query 102203 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAG 102261
||| ||||| ||||||||| |||| | ||| ||| | || | ||||||||||||||| |
Sbjct 1624834 TGTCGAGGGCATCTTCTTCAGTGGTGCATTC-GCGTCCATCTTTTGGCTCAAGAAGCGCG 1624892
Query 102262 GTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACC 102321
| |||||||| || || |||||| ||||| || || || ||||||||||| | |||
Sbjct 1624893 GCCTCATGCCCGGGCTTACCTTCTCAAACGAACTCATATCCCGTGACGAGGGTTTGCACA 1624952
Query 102322 AAGAGTTTGC 102331
|| |||||
Sbjct 1624953 CCGACTTTGC 1624962
Score = 84.2 bits (92), Expect = 3e-11
Identities = 92/122 (75%), Gaps = 3/122 (2%)
Strand=Plus/Plus
Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 101873
||||| || |||||| |||| || || ||||||||| |||| ||||| | || | ||
Sbjct 1624379 TGGACAGCCGAAGAGATAGACCTGTCCAAGGATTTGCACGACTGGAATAATCGCCTGAAC 1624438
Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933
|| |||||||| | ||||| ||||| ||||||||||||||| || ||||| ||
Sbjct 1624439 GACGATGAAAAGTATTTCATTTCTCACATCTTGGCATTCTTTGCTGCCTCGGATGGCATC 1624498
Query 101934 GT 101935
||
Sbjct 1624499 GT 1624500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620738916083280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |