Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000687475.1_202014-05-09]
449 sequences; 39,397,682 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq2 217 2e-51
>seq2
Length=1075658
Score = 217 bits (240), Expect = 2e-51
Identities = 1056/1652 (64%), Gaps = 51/1652 (3%)
Strand=Plus/Plus
Query 109414 TAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGTTTG 109473
|| ||||| || || |||||||| |||||| || | ||||| || | || |||
Sbjct 440793 TAGTACATGCCAGTCTTGAGACCCAGCTTCCACCCGGCAAAGTGCATCGACGTGATCTTG 440852
Query 109474 GAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGACCA 109533
| || || || ||| | ||| | ||||| ||||| ||||| || |||
Sbjct 440853 CCCATGGTTGGGTCCTTCATGTGAATGTTGAGAGACTGGGACTGGTCGATAAAGGCACCG 440912
Query 109534 CGATCAGCCGCCATGTCGATGATACACTTTTGGCT----AATTTCCCAGACAGTCTTGTA 109589
|| || || ||||| | | ||| | ||| |||||||||||| ||||||||
Sbjct 440913 CGGTCGGCGGCCATCTGCAC----CACATGACGCTGCGAAATTTCCCAGACCGTCTTGTA 440968
Query 109590 CAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTCAC 109649
|| | ||| | || ||||||||| |||||| || || ||||| | |
Sbjct 440969 CAGAGCCTTTACCTCGCCGGGAATGTTGGGGATGTTCTGGATCGAGCCGTTCTCGGCAAT 441028
Query 109650 CATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGTCAACAAG--A 109707
||| ||| |||||| | | ||||| ||||| | | |||||| | | ||| |
Sbjct 441029 GATGCGATTCTTCATGGCGTCTGACCACAGACCCATGTCGACGAGATCCTTGAGAAGCCA 441088
Query 109708 TGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTG 109767
|| |||||| || || || || || || |||||| |||| ||||| | ||||
Sbjct 441089 TGG--GTTGACGACCTGGAACTCGCCCGCCAGGACGCGTCGCTGGTAAATGTTGGACGTG 441146
Query 109768 TAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGA 109827
||||| ||||| ||||| |||||||| || || || | ||||| || |||||||||||
Sbjct 441147 TAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGGACGCCGTGGGCATGGGC 441206
Query 109828 GCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAA 109887
|| | || || ||| || | || | | ||| | | |||| | | |||||
Sbjct 441207 GCGAGCAGCAGCGAGTTGCGAATCCCGTGCTCCTTGATCTGCTCCTTGAGGGAATCCCAC 441266
Query 109888 TCATAACGACCACTAAATTTAGTC----TCACCATCCCACATATCTGGTTGAAGTACACC 109943
|| |||| || | | | |||| ||| |||| || || || | ||
Sbjct 441267 TC-------CCAC--AAGTCGGACGGCGTCACGTTCC-ACATGTCAAACTGCAGGATGCC 441316
Query 109944 CTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGA 110003
|||| || ||||| |||||||| | ||| | ||||| ||| ||||| |||
Sbjct 441317 TTCAGAGGCCGGAGATCCCTTGAACGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTCCAC 441376
Query 110004 TGAAGCC-TCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAG 110062
|| ||| || || || || || || || ||||||||||| || |||| |||||
Sbjct 441377 CGACGCCGTCAAG-GCGGCGTGGTAGATGGTCTCAAAAATCTGCTTGTTCAGCTCGCGAG 441435
Query 110063 ACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACAC 110122
||| | | || ||||| | | | || || | || || | || |||||||
Sbjct 441436 CCTCGGGAGACTCAAAGGGCATGCGAAGCGCAAGGAAGGCGTCGGCCAAGCCTTGAACAC 441495
Query 110123 CGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGT 110182
||| ||||||||| |||||| |||||| | || || || |||||||| ||
Sbjct 441496 CGACACCAATGGGACGATGCCGCATGTTGCTGTTGCGTGCTTCTTGGACGGGGTAGTGGT 441555
Query 110183 TGCGGTCGATGACCCGATTGAGATTCTTCGTCA--CAGTCTTCGTGATTTCATGGAGTTT 110240
|| |||||||| | |||||||| | | || || | |||| || || || ||
Sbjct 441556 TGACGTCGATGATCTTGTTGAGATT-TCGGACAACCACGCGG-GTGACGTCGTGCAGCTT 441613
Query 110241 GTCGTAATCGAACGTTTTCGTCTCCTTATTG-ACATATTTGGGGAGAGCAATAGACGCAA 110299
| | | ||| || || | | | || | ||| | ||| || |||| || ||||
Sbjct 441614 TTGGAAGTCGTAC-TTGCCTTGGTCGTAGTCCACAAAGGCGGGCAGGGCAAGGGAGGCAA 441672
Query 110300 GATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGG 110359
| ||||| || | | |||||| | | | ||| || | ||| || || || | |||||
Sbjct 441673 GGTTGCAGACGGCAACCTCGTCGGGGGCCGAGTACTCGATAATCTCGGTGCAGAGGTTGG 441732
Query 110360 AACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGA 110419
| || |||| |||||||||||||| || || |||||| |||||| || |
Sbjct 441733 AGCTGCGAATGGTTCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAATGATCCTTGTACA 441792
Query 110420 GCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCG 110478
|||| | ||| | ||||| || ||||| | || ||| || | | ||| | | || | |
Sbjct 441793 GCATAAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGATCGAGTACCACAGCTTCTG-G 441851
Query 110479 GCGGGGACAG--TTGCGTTAGCGA-GACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCA 110535
||| ||| | ||||| || | | ||||| ||||||||| ||||| |||||
Sbjct 441852 GCGCGGATTGTCTTGCG---GCCACGGCCTTCGCGCTCGTACTTTTCATACAAAGCCTCA 441908
Query 110536 AATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTT-GTCGGGACAGAAGAGGGACCA 110594
|| || | ||||| || | || ||| || || || ||| || | ||||| |||
Sbjct 441909 AACTCGTCGCCGTAGCAGTCGGCGAG-CCCAGGGCATTCGTTGGGGCACATGAGGGTCCA 441967
Query 110595 ATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAG 110654
| ||| || ||| || | ||||||||| ||||| || ||||||| ||| ||| ||
Sbjct 441968 GTCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGGATCCACAGCGCAAGGAAGAG 442027
Query 110655 GTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGAT 110714
||| || || | || || | || ||||| | || || | || || | ||
Sbjct 442028 GTCGCGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTTCTGAGATCAAGGAATTCAAAGAC 442087
Query 110715 ATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCC--TTACGACGACCCGCC-TG 110771
||| | |||||| || || || |||| |||| || ||| | | ||||| ||
Sbjct 442088 ATCGGCGTGCCAGGGCTCCAGGTAGATGGCGAAGGCGCCCGGTCGCTTGTTGCCGCCTTG 442147
Query 110772 GTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTG 110831
|| || || | || ||| |||||||| | ||||| |||| | || | ||
Sbjct 442148 GTCGACGTATCTGGCAGTGTTGTTGAAGACTCGCAGCATGGGAACGACGCCGTTCGAGGT 442207
Query 110832 ACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAAT 110891
|| || || || ||| ||| | ||||||||| ||||| | || || ||
Sbjct 442208 GCCGTTGGTGCCGGCAATGTAGGATCCGGTAGCACGAATGCGGTGGACGTTCAGGCCGAT 442267
Query 110892 ACCACCCGCCCACTTACTAAT--TTGTGCACACTCTGTGAGTGTACCATAAATACCATCA 110949
||| || ||| ||| ||| | | ||| | ||| |||| || | || || || ||
Sbjct 442268 ACCGCCGGCCATTTTAGAAATCATGGCGCA-AGTCT-TGAGAGTGTCGTAGATGCCCTCG 442325
Query 110950 ATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCC 111009
|| ||| |||| || | | || ||||| || || | |||| ||||||| |||
Sbjct 442326 ATGCTGTCTTCCTTCATGTCGACGAGGAAGCACGAGGAAAGCTGACACTGAGGCGTGCCC 442385
Query 111010 GCATTGAAGAGTGTAGGTGTCGCATGAATGAA 111041
|| |||||||| ||||||| || || ||||
Sbjct 442386 GCGTTGAAGAGGGTAGGTGAGGCGTGGGTGAA 442417
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588972694372200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |