Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000687475.1_202014-05-09]
449 sequences; 39,397,682 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq56 105 4e-17
>seq56
Length=194926
Score = 105 bits (116), Expect = 4e-17
Identities = 131/177 (74%), Gaps = 2/177 (1%)
Strand=Plus/Minus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|| || || ||||| ||||| ||| ||||| ||||| |||||||| || || || ||
Sbjct 70032 TTGTAGTCGGCTAGGGTTCTCCCATCCTCAAGCTGCTTACCAGCAAAGATGAGTCGCTGC 69973
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|||||||||||||| || |||||||||||||| || || ||| ||||| ||||||
Sbjct 69972 TGATCAGGAGGAATGCCCTCCTTGTCTTGAATTTTCGACTTCACATTATCAATGGTATCA 69913
Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | | || || || || || || ||||| || ||||| |||||||| ||
Sbjct 69912 GACGACTCCA-CCTCGAGCGTGATGGTCTTCCCGGTCAGCGTCTTGACGAAAATCTG 69857
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268159940211452
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |