Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000687475.1_202014-05-09]
449 sequences; 39,397,682 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq56 84.2 4e-11
>seq56
Length=194926
Score = 84.2 bits (92), Expect = 4e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983
|| ||||||||||| || | || ||| || ||||| || || || || || ||||| |||
Sbjct 69999 TGCTTACCAGCAAAGATGAGTCGCTGCTGATCAGGAGGAATGCCCTCCTTGTCTTGAATT 69940
Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043
|| || |||||| || ||||| ||||| || || || || || ||||| || ||
Sbjct 69939 TTCGACTTCACATTATCAATGGTATCAGACGACTCCACCTCGAGCGTGATGGTCTTCCCG 69880
Query 172044 GTTAATGTTTTAATGAATATCTGCAT 172069
|| | || || | ||| ||||||||
Sbjct 69879 GTCAGCGTCTTGACGAAAATCTGCAT 69854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905130919924200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |