Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000687475.1_202014-05-09]
449 sequences; 39,397,682 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq2 250 2e-61
seq56 118 1e-21
seq13 111 1e-19
>seq2
Length=1075658
Score = 250 bits (276), Expect = 2e-61
Identities = 1036/1609 (64%), Gaps = 58/1609 (4%)
Strand=Plus/Plus
Query 138424 CCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTTGATCAAG 138483
||||| | |||||||||||||| ||||| | || ||||| || | || |
Sbjct 441015 CCGTTCTCGGCAATGATGCGATTCTTCATGGCGTCTGACCACAGACCCATGTCGACGAGA 441074
Query 138484 TCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAA 138543
|| || | || || ||| | |||||| || || || |||| || || || ||||
Sbjct 441075 TCCTTGAGAAGCCATGGGTTGACGACCTGGAACTCGCCCGCCAGGACGCGTCGCTGGTAA 441134
Query 138544 ATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCG 138603
|||||| ||| | ||||| || | |||||||| ||||||||||| | ||||| |||
Sbjct 441135 ATGTTGGACGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGGACGCC 441194
Query 138604 GTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTG 138663
|| |||||| ||| | || || || || || | ||||| |||||| | ||||||
Sbjct 441195 GTGGGCATGGGCGCGAGCAGCAGCGAGTTGCGAATCCCGTGCTCCTTGATCTGCTCCTTG 441254
Query 138664 AGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATT 138723
|| || ||| |||||||| ||| || | ||||||||| || |||| | ||
Sbjct 441255 AGGGAATCCCACTCCCACAAGTCGGACGGCGTCACGTTCCACATGTCAAACTGCAGGATG 441314
Query 138724 CCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCG 138783
|| | || ||| || | | ||| ||| ||| ||| | |||| |||
Sbjct 441315 CCTTCAGAGGCCGGAGATCCCTTGAACGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTCC 441374
Query 138784 TTGCTCGCC-TCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCG 138842
|||| || || || | | ||| || || || |||||||| || ||| ||
Sbjct 441375 ACCGACGCCGTCAAG-GCGGCGTGGTAGATGGTCTCAAAAATCTGCTTGTTCAGCTCGCG 441433
Query 138843 GGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCAC 138902
||||||| ||| | |||||||| ||| ||| |||||||||| ||||| ||
Sbjct 441434 AGCCTCGGGAGACTCAAAGGGCATGCGAAGCGCAAGGAAGGCGTCGGCCAAGCCTTGAAC 441493
Query 138903 GCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCG-GCTTC---GATAGGAT 138958
|| || || | || ||||| |||| || ||| ||||| ||||| || || |
Sbjct 441494 ACCGACACCAATGGGACGATGCCGCA----TGTTGCTGTTGCGTGCTTCTTGGACGGGGT 441549
Query 138959 AATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCAC----CTTA-GTCGT-AT 139012
| | ||| || |||||||| ||||| | |||||| || ||||| | | |||||
Sbjct 441550 AGTGGTTGACGTCGATGATCTTGTTGAGATTTCGGACAACCACGCGGGTGACGTCGTGCA 441609
Query 139013 GCTTTAATCGTTCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGT 139072
|||| || || ||||| |||| ||| | || ||| ||||| |
Sbjct 441610 GCTT------TTGGAAGTCGTACTTGCC----TTG-----GTCGTAGTCCACAAAGGCGG 441654
Query 139073 TGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAA 139132
| || ||||| | |||||| || || || ||||||||| | ||| |||| ||
Sbjct 441655 GCAGGGCAAGGGAGGCAAGGTTGCAGACGGCAACCTCGTCGGGGGCCGAGTACTCGATAA 441714
Query 139133 TTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGT 139192
| |||| || | || | || || || || || | || ||||| || | ||
Sbjct 441715 TCTCGGTGCAGAGGTTGGAGCTGCGAATGGTTCCCAAGTTCTTCTGGTTGCTCTTCCTGT 441774
Query 139193 TACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGA 139252
| ||| ||| ||||| |||||| | || ||||||| || || | ||| | ||
Sbjct 441775 TGCAATGATCCTTGTACAGCATAAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGATCG 441834
Query 139253 ATTTGAACAAGTCCCTAGCTTGTATT-TGACGCACGTAAAGTTCGTCGCGCTCGTACTTT 139311
| | ||| | | || | ||| | || | | | | |||||||||||||||
Sbjct 441835 AGTACCACAGCTTCTGGGCGCGGATTGTCTTGC-GGCCACGGCCTTCGCGCTCGTACTTT 441893
Query 139312 TCGTAGAGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGG 139370
|| || | | || || ||| || |||||| ||| | || | | || | || ||
Sbjct 441894 TCATACAAAGCCTCAAACTCG-TCGCCGTAGCAGTCGGCGAGCCCAGGGCATTCGTTGGG 441952
Query 139371 ACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCA 139430
|||||||| | ||| |||| ||| || ||| ||| ||||||| || || || |||||
Sbjct 441953 GCACATGAGGGTCCAGTCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGGATCCA 442012
Query 139431 CAAAGCGAACAGCAAATCGC--GCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATG 139488
|| || | | | |||| |||| || || ||| || ||| | | |
Sbjct 442013 CAGCGCAAGGAAGAGGTCGCGAGCGCGGACT--TCCTCCTTGCCGTGGTTCTTTCTGAGA 442070
Query 139489 TTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCC---T 139545
| |||||| ||||| || || |||||||| || ||||| |||||||| | ||||| |
Sbjct 442071 TCAAGGAATTCAAAGACATCGGCGTGCCAGGGCTCCAGGTAGATGGCGAAGGCGCCCGGT 442130
Query 139546 TTCCGTTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGC 139605
| ||||| ||||| ||||||| || ||| || ||||| || |||| ||| ||
Sbjct 442131 CGCTTGTTGCCGCCTTGGTCGACGTATCTGGCAGTGTTGTTGAAGACTCGCAGCATGGGA 442190
Query 139606 TCCAGACCGCTCGCTGTTCCGTTGGTGCTACGG--ATG--GGA-CTGTTGCGAGCTCGGA 139660
| | ||| ||| || |||||||||| ||| ||| ||| | | | ||| || |
Sbjct 442191 ACGACGCCGTTCGAGGTGCCGTTGGTGC--CGGCAATGTAGGATCCGGT---AGCACGAA 442245
Query 139661 CGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGT 139719
| || || || | |||||| |||||| | | ||| || || | ||||| || |
Sbjct 442246 TGCGGTGGACGTTCAGGCCGATACCGCCGGCCATTTTAGAAATCATGGCGCAAGTCTTG- 442304
Query 139720 AATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAA 139779
| || ||||| || || |||||||| |||| ||| ||| || ||||| || |||
Sbjct 442305 AGAGTGTCGTAGATGCCCTCGATGCTGTCTTCCTTCATGTCGACGAGGAAGCACGAGGAA 442364
Query 139780 AGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGT 139839
|| || | |||||| || || || ||||| ||||| ||||| | ||
Sbjct 442365 AGCTGACACTGAGGCGTGCCCGCGTTGAAGAGGGTAGGTGAGGCGTGGGTGAAGAATTTA 442424
Query 139840 TTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACA 139899
| ||||| | | ||| ||||| | | ||| | |||| | ||| ||| ||||||
Sbjct 442425 CTGGACATGAGGTTGTAGGTTTCCAGGACGCGCTCAATGTTGTCTCCCCAGATGCCGACA 442484
Query 139900 GAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGA 139959
| || ||||| | ||| || || |||||| | | | ||| || | || |||
Sbjct 442485 GCAACACGCATGATCATGTGCTGAGGTCGTTCGACAATCTTGCCGTCCAGCTTCAGGAGA 442544
Query 139960 TA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
|| | || ||| || |||||| | ||||||||| ||||||||| ||
Sbjct 442545 TACGATCG--CTCCAGCGTCTTGAAACCAAAGTACTGATAGTTGAAGTC 442591
>seq56
Length=194926
Score = 118 bits (130), Expect = 1e-21
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || || || || ||||| || ||||| ||||| || | |
Sbjct 69626 ATGCAAATCTTTGTCAAGACACTGACGGGAAAAACAATCACGCTGGAAGTTGAGTCGTCA 69685
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| |||||||| ||||| || || ||||| ||
Sbjct 69686 GACACCATTGACAACGTCAAGTCGAAGATTCAAGACAAGGAAGGGATTCCCCCCGACCAG 69745
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882
|| || | ||||||||||| || ||||| ||||| || |||| || | || || ||
Sbjct 69746 CAGCGACTTATCTTTGCCGGCAAGCAGCTCGAGGA-CGGACGAACATTGGCCGACTACAA 69804
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
||| || ||||| || || || ||| ||||| |||| | ||||| |||
Sbjct 69805 CATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGTCTCCGCGGCGGC 69853
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || ||||| ||||| || || || |||||||| || || | |
Sbjct 69854 ATGCAGATTTTCGTCAAGACGCTGACCGGGAAGACCATCACGCTCGAGGTGGAGTCGTCT 69913
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || || || |||||||| || || || ||||| |||||
Sbjct 69914 GATACCATTGATAATGTGAAGTCGAAAATTCAAGACAAGGAGGGCATTCCTCCTGATCAG 69973
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || | |||||||| || || ||||| |||||| ||||| | | | || || |||
Sbjct 69974 CAGCGACTCATCTTTGCTGGTAAGCAGCTTGAGGATGGGAGAACCCTAGCCGACTACAAC 70033
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
||||||||||| ||||| | ||| ||||| | || |||| || |||
Sbjct 70034 ATTCAAAAGGAGTCGACGTTGCACCTGGTGCTCCGCCTGCGTGGTGGC 70081
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || || || || || || || || | ||
Sbjct 69398 ATGCAGATCTTCGTCAAGACCCTCACTGGGAAGACCATCACCCTGGAGGTGGAGTCTTCC 69457
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || || ||||||||||| || || || || ||||| ||
Sbjct 69458 GACACCATCGACAATGTCAAGGCGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCAG 69517
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||| ||||||||||| || ||||| || || || | | | || | || || |||
Sbjct 69518 CAACGCTTGATCTTTGCTGGCAAACAACTCGAAGACGGCCGCACCCTGGCCGACTACAAC 69577
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || |||||||| || || || | || |||| ||||||| |||
Sbjct 69578 ATCCAGAAGGAATCCACCCTCCATCTCGTTCTGCGCCTGCGCGGCGGC 69625
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| ||||| ||||| | || || || ||||| || || || || ||||| || || |
Sbjct 69167 ACCATGCAAATCTTCGTAAAGACCCTCACCGGAAAGACCATCACCCTCGAGGTGGAGTCT 69226
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
| ||||| | || | || || || || |||||||| || || || || |||||
Sbjct 69227 TCTGACACCATCGACAATGTCAAGTCGAAAATTCAAGACAAGGAGGGCATCCCGCCCGAC 69286
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880
|| || || ||||||||||| || |||||||| || ||| | | | || | || ||
Sbjct 69287 CAGCAGCGCTTGATCTTTGCTGGTAAACAGCTCGAAGATGGCCGCACCCTGGCCGACTAC 69346
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| || |||||||| || || || |||| | || |||| || ||
Sbjct 69347 AACATCCAGAAGGAATCCACCCTTCATCTGGTTCTTCGCCTGCGTGGCGG 69396
>seq13
Length=702126
Score = 111 bits (122), Expect = 1e-19
Identities = 133/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 24713 TTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTA 24772
||| | || || || || || || || || |||||||| || || || ||||||| |
Sbjct 289077 TTTGTGAAGACCCTGACGGGCAAGACCATCACGCTCGAGGTCGAGTCCTCCGACACGATC 289136
Query 24773 GAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTG 24832
|| | || || |||||||| ||||| || || || |||||||| || || ||||||
Sbjct 289137 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTTTG 289196
Query 24833 ATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAG 24892
|||||||| || || |||||||||||| ||| | || | || || |||||||| |||
Sbjct 289197 ATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGAACCCTGGCCGACTACAACATTCAGAAG 289256
Query 24893 G 24893
|
Sbjct 289257 G 289257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449895074949720
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