Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000687475.1_202014-05-09] 449 sequences; 39,397,682 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=2302571 Score = 84.2 bits (92), Expect = 2e-11 Identities = 116/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 110728 GTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTTTAA-GAAAGAATCGTT 110786 ||| |||||| | || | |||||| || || || | | ||| || |||| | | || Sbjct 1624504 GTTGACGATGCCATCCGAGGCAGCAAAGAATGCCAAGATGTGAGAAATGAAATACTT-TT 1624446 Query 110787 CCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACATGTCGATCTCTTCGA 110846 | | ||||||||| ||| |||||||| | || |||||||||| ||| ||||||||| Sbjct 1624445 CATCGTCGTTCAGGCGATTATTCCAGTCGTGCAAATCCTTGGACAGGTCTATCTCTTCGG 1624386 Query 110847 CCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCA 110886 | ||||| | || | | |||||||||||| |||||| Sbjct 1624385 CTGTCCAGAAAGAAGCCTCAGCCTTCTTGTACATTTGCCA 1624346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445091901907680