Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000687475.1_202014-05-09]
449 sequences; 39,397,682 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq2 239 6e-58
seq1 95.1 1e-14
>seq2
Length=1075658
Score = 239 bits (264), Expect = 6e-58
Identities = 1165/1841 (63%), Gaps = 27/1841 (1%)
Strand=Plus/Plus
Query 117798 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 117857
|||| | ||||||| ||||| ||| ||| | | || | ||||||||| || |||
Sbjct 440748 TCAACGGTGAACTGGATGGGGGCCGCGGCGGCTTGCGTGCGCAAGTAGTACATGCCAGTC 440807
Query 117858 TTGAGCCCCTGCTTCCA---GGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGA 117914
||||| ||| ||||||| |||| | ||||| || | | |||| | ||||||
Sbjct 440808 TTGAGACCCAGCTTCCACCCGGCAAAG---TGCATCGACGTGATCTTGCCCATGGTTGGG 440864
Query 117915 CTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCC 117974
| |||| | ||| | | ||||| || ||||| ||| || || || || |||
Sbjct 440865 TCCTTCATGTGAATGTTGAGAGACTGGGACTGGTCGATAAAGGCACCGCGGTCGGCGGCC 440924
Query 117975 ATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCA 118034
|| | | ||||| | | |||||||| || ||| |||| || ||| | ||
Sbjct 440925 ATCTGCACCACATGACGCTGCGAAATTTCCCAGACCGTCTTGTACAGAGCCTTTACCTCG 440984
Query 118035 TCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATA 118094
| || || | ||| || ||||| || || | | | ||| ||| ||||||
Sbjct 440985 CCGGGAATGTTGGGGATGTTCTGGATCGAGCCGTTCTCGGCAATGATGCGATTCTTCATG 441044
Query 118095 TCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAA 118152
| | |||||| ||||| || | |||||||| | || ||| | |||| ||
Sbjct 441045 GCGTCTGACCACAGACCCATGTCGACGAGATCCTTGAGAAGCCATGGGT--TGACGACCT 441102
Query 118153 CAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACT 118212
||||| ||||| ||| ||||| | | || || |||| |||||| ||||| |||||||
Sbjct 441103 GGAACTCGCCCGCCAGGACGCGTCGCTGGTAAATGTTGGACGTGTAGGGCTCGAAGCACT 441162
Query 118213 CATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGT 118272
| ||||| |||| || || | ||||| || ||||||||||| || | || || ||
Sbjct 441163 CGTTGTTGCCCAGAATCTGCGACGTGGACGCCGTGGGCATGGGCGCGAGCAGCAGCGAGT 441222
Query 118273 TACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTC---GTAGTTGAGCT 118329
| || | || | ||| | || | |||||||| | ||||| || ||| | |
Sbjct 441223 TGCGAATCCCGTGCTCCTTGATCTGCTCCTTGAGGGAATCCCACTCCCACAAGTCGGAC- 441281
Query 118330 TTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAA 118389
| | | | | |||||| |||||||| ||||| |||| || || || ||||||| |
Sbjct 441282 --GGCGTCACGTTCCACATGTCAAACTGCAGGATGCCTTCAGAGGCCGGAGATCCCTTGA 441339
Query 118390 ATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGAT 118449
| || || || ||||| ||| |||| || |||| | ||| ||||| |
Sbjct 441340 ACGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTCCACCGACGCCGTCAAGGCGGCGTGGT 441399
Query 118450 ACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTC 118509
| || || |||||||| | |||| | |||||| || ||||| | | |
Sbjct 441400 AGATGGTCTCAAAAATCTGCTTGTTCAGCTCGCGAGCCTCGGGAGACTCAAAGGGCATGC 441459
Query 118510 GGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCA 118569
| | || || | || || | ||||| ||||||| ||||| || ||||| | ||
Sbjct 441460 GAAGCGCAAGGAAGGCGTCGGCCAAGCCTTGAACACCGACACCAATGGGACGATGCCGCA 441519
Query 118570 TATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGAT 118629
| || || || || | ||||| || || ||||| | | | || ||||
Sbjct 441520 TGTTGCTGTTGCGTGCTTCTTGGACGGGGTAGTGGTTGACGTCGATGATCTTGTTGAGAT 441579
Query 118630 TTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTT 118689
|| | || || |||| || || ||||||| | | || | ||| || |
Sbjct 441580 TTCGGACAACCACGCGGGTGACGTCGTGCAGCTTTTGGAAGTCGTACTTGCCTTGGTCGT 441639
Query 118690 CATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTAT 118749
| ||| | || ||||| | || || || || || || | ||| ||
Sbjct 441640 AGTCCACAAAGGCGGGCAGGGCAAGGGAGGCAAGGTTGCAGACGGCAACCTCGTCGGGGG 441699
Query 118750 CAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTT 118809
| | |||||| ||||| || ||||| | ||| || || |||||| ||||||||||| |
Sbjct 441700 CCGAGTACTCGATAATCTCGGTGCAGAGGTTGGAGCTGCGAATGGTTCCCAAGTTCTTCT 441759
Query 118810 GATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTT 118869
| || ||| |||| || ||||||||| ||||| | || | || ||||| || |
Sbjct 441760 GGTTGCTCTTCCTGTTGCAATGATCCTTGTACAGCATAAAGGGGTTGCCAGTCTCGGTCT 441819
Query 118870 GGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCC 118928
| | || ||| || | | ||| | | || | || | | || | | | || ||
Sbjct 441820 GAGCCTCGAGGATCGAGTACCACAGCTTCTG-GGCGCGGATTGTCTTGCGGCCACGGCCT 441878
Query 118929 TCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCT 118988
|| |||||||||| || | || |||||||| || || | || | ||||||
Sbjct 441879 TCGCGCTCGTACTTTTCATACAAAGCCTCAAACTCGTCGCCGTAGCAGTCGGCGAGCCCA 441938
Query 118989 GGTGCCTT-ATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAA 119047
|| || || | ||||| | ||| | ||| | ||| || ||| || |||||||||||
Sbjct 441939 GG-GCATTCGTTGGGGCACATGAGGGTCCAGTCGCCATTCTTCTCGACACGCTTCATGAA 441997
Query 119048 GAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTG 119107
|||||| |||||||| ||||| |||||| || ||| ||| |||| || | || ||
Sbjct 441998 GAGGTCGGGGATCCACAGCGCAAGGAAGAGGTCGCGAGCGCGGACTTCCTCCTTGCCGTG 442057
Query 119108 ATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGC 119167
|| | | || | || || | || ||| |||||||| || |||||||| | ||
Sbjct 442058 GTTCTTTCTGAGATCAAGGAATTCAAAGACATCGGCGTGCCAGGGCTCCAGGTAGATGGC 442117
Query 119168 GATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATAC 119224
|| | ||| || || | |||| || || || |||||| ||| || ||
Sbjct 442118 GAAGGCGCCCGGTCGCTTGTTGCCGCCTTGGTCGACGTATCTGGCAGTGTTGTTGAAGAC 442177
Query 119225 ACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATT 119284
|| ||||| |||| || || | || ||| || || || ||| || |
Sbjct 442178 TCGCAGCATGGGAACGACGCCGTTCGAGGTGCCGTTGGTGCCGGCAATGTAGGATCCGGT 442237
Query 119285 GGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCA 119344
|| | | ||||| || || || ||||| || ||| || || || |||||
Sbjct 442238 AGCACGAATGCGGTGGACGTTCAGGCCGATACCGCCGGCCATTTTAGAAATCATGGCGCA 442297
Query 119345 CTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCA 119404
| ||||| || ||||||| || ||||| ||| |||| | ||| |||||||||
Sbjct 442298 AGTCTTGAGAGTGTCGTAGATGCCCTCGATGCTGTCTTCCTTCATGTCGACGAGGAAGCA 442357
Query 119405 GCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464
|| | ||| | || || || ||||||||||| || |||| |||||| ||||
Sbjct 442358 CGAGGAAAGCTGACACTGAGGCGTGCCCGCGTTGAAGAGGGTAGGTGAGGCGTGGGTGAA 442417
Query 119465 CA--TACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGA 119522
| | || |||||| || |||||| |||| |||| ||||| || ||
Sbjct 442418 GAATTTACT--GGACATGAGGTTGTAGGTTTCCAGGACGCGCTCAATGTTGTCTCCCCAG 442475
Query 119523 ATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGC 119582
|| |||| | || ||||| | ||||| || ||| ||| | | | || || |||
Sbjct 442476 ATGCCGACAGCAACACGCATGATCATGTGCTGAGGTCGTTCGACAATCTTGCCGTCCAGC 442535
Query 119583 CTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 119623
|| |||| || ||||| ||||||| |||||| ||
Sbjct 442536 TTCAGGAGATACGATCGCTCCAGCGTCTTGAAACCAAAGTA 442576
>seq1
Length=2302571
Score = 95.1 bits (104), Expect = 1e-14
Identities = 106/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075
||||| || ||| | ||||||||||||||| |||||||| || |||||| || ||
Sbjct 1624962 GCAAAGTCGGTGTGCAAACCCTCGTCACGGGATATGAGTTCGTTTGAGAAGGTAAGCCCG 1624903
Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135
|||||||| || |||||||| | ||| || || | |||| ||| |||||||||
Sbjct 1624902 GGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGACGCGAATGCACCACTGAAGAAGATG 1624843
Query 130136 CCCTCCACACACGCGAACGCAA 130157
||||| ||| ||||| ||||
Sbjct 1624842 CCCTCGACAGCGGCGAAGGCAA 1624821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618431729032440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |