Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29] 139 sequences; 33,567,624 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq32 107 4e-18 >seq32 Length=314566 Score = 107 bits (118), Expect = 4e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 ||| | ||||||||| | ||| ||| || |||||||||||||| ||||||||| | Sbjct 225138 CTTCTCGGCATGAACTCCACACTGATGAAGCAATACATCGAATTCGTTGCCGACCGCCTG 225079 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 || ||||| || || | || || |||||||| | ||| || |||| ||||||||| Sbjct 225078 TTGGTTGCTCTCGGGAATGAAAAGGTGTACAAGACAGCGAATCCGTTTGATTTTATGGAG 225019 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 || || || || ||||||||||| || || ||||| || |||| || |||| | Sbjct 225018 AATATCTCCCTGGGTGGCAAGACCAACTTTTTTGAGAAGCGAGTTGGTGAATACCAGAAG 224959 Query 230626 CCTGGTGTGATG 230637 | ||||| ||| Sbjct 224958 GCCGGTGTCATG 224947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057822116081570