Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29]
139 sequences; 33,567,624 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq32 107 4e-18
>seq32
Length=314566
Score = 107 bits (118), Expect = 4e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505
||| | ||||||||| | ||| ||| || |||||||||||||| ||||||||| |
Sbjct 225138 CTTCTCGGCATGAACTCCACACTGATGAAGCAATACATCGAATTCGTTGCCGACCGCCTG 225079
Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565
|| ||||| || || | || || |||||||| | ||| || |||| |||||||||
Sbjct 225078 TTGGTTGCTCTCGGGAATGAAAAGGTGTACAAGACAGCGAATCCGTTTGATTTTATGGAG 225019
Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625
|| || || || ||||||||||| || || ||||| || |||| || |||| |
Sbjct 225018 AATATCTCCCTGGGTGGCAAGACCAACTTTTTTGAGAAGCGAGTTGGTGAATACCAGAAG 224959
Query 230626 CCTGGTGTGATG 230637
| ||||| |||
Sbjct 224958 GCCGGTGTCATG 224947
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057822116081570
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |