Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29]
139 sequences; 33,567,624 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq45 93.3 4e-14
>seq45
Length=238474
Score = 93.3 bits (102), Expect = 4e-14
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 5590 GATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAA 5649
||| ||||| || | || |||||| ||| ||||| || ||| | | | || ||||||
Sbjct 75208 GATGAGCTGGGCCACGCGATCGCCCTCCTTGACCTCAAAGTCGGTCTCGGCGTGGTTGAA 75149
Query 5650 CAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGAT 5709
||||| | || | |||||||| || ||||| || ||||| || || ||||||
Sbjct 75148 CAGCAAAATCTTTACTTGCCCGCGGTAATCAGCGTCAATGACGCCGGCACCTGTGTCGAT 75089
Query 5710 GAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753
|||||||||| || || || |||||||| || | ||||||||
Sbjct 75088 GAAGTGCTTGGATGCAAGCCCCGAGCGGGGGGCAATGCGGCCGT 75045
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430053671460968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |