Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29] 139 sequences; 33,567,624 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq45 93.3 4e-14 >seq45 Length=238474 Score = 93.3 bits (102), Expect = 4e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 5590 GATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAA 5649 ||| ||||| || | || |||||| ||| ||||| || ||| | | | || |||||| Sbjct 75208 GATGAGCTGGGCCACGCGATCGCCCTCCTTGACCTCAAAGTCGGTCTCGGCGTGGTTGAA 75149 Query 5650 CAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGAT 5709 ||||| | || | |||||||| || ||||| || ||||| || || |||||| Sbjct 75148 CAGCAAAATCTTTACTTGCCCGCGGTAATCAGCGTCAATGACGCCGGCACCTGTGTCGAT 75089 Query 5710 GAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 |||||||||| || || || |||||||| || | |||||||| Sbjct 75088 GAAGTGCTTGGATGCAAGCCCCGAGCGGGGGGCAATGCGGCCGT 75045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430053671460968