Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29]
139 sequences; 33,567,624 total letters
Query= NC_005946.1
Length=105903
Score E
Sequences producing significant alignments: (Bits) Value
seq36 95.1 8e-15
>seq36
Length=277325
Score = 95.1 bits (104), Expect = 8e-15
Identities = 135/181 (75%), Gaps = 8/181 (4%)
Strand=Plus/Plus
Query 71419 GTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGT-CCTT 71477
||||| | || |||| |||||| ||||||||||||| ||| ||| ||||| | || |
Sbjct 33440 GTCATTCGCGACGGAATGGCGTGCGGGTTGATGATGATGTCTGGCGTGACCCCTTCCCGT 33499
Query 71478 GTCGAAGGGCATGTCCTCCTG--GGTCAGGACAGCTCCGCATGTCCCCTTTTGCGCCGTG 71535
|| ||||||||||||||||| ||| | | || | || || |||||||| |||||
Sbjct 33500 GT-AAAGGGCATGTCCTCCTGCCGGT-ACGTCA-CACCAATCGTGCCCTTTTG-TCCGTG 33555
Query 71536 A-ATGACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTGAC 71594
| ||||||||||||||||| |||| ||| | ||| |||| | || ||||||||
Sbjct 33556 ACGAGACGCAAACTTGTCGCCAATCTGCGGGATCTTGGTTGTCCGAACCCGGACCTTGAC 33615
Query 71595 G 71595
|
Sbjct 33616 G 33616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338764226111256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |