Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29]
139 sequences; 33,567,624 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq1 206 3e-48
seq3 136 4e-27
seq31 125 7e-24
seq25 107 2e-18
>seq1
Length=1559860
Score = 206 bits (228), Expect = 3e-48
Identities = 919/1437 (64%), Gaps = 29/1437 (2%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||||||||| |||||||| |||| || || ||| || | ||| |||||| ||||
Sbjct 377908 TTGACGACCTGGAACTCGCCCGCCAGGACGCGTCGCTGGTAAATGTTGGACGTGTAGGGC 377967
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| |||||||| || || | || | || ||||||||| ||| | |
Sbjct 377968 TCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGGACGCCGTGGGCATGGGCGCGAGC 378027
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| | || ||||| | ||||||| |||||| | ||||| || | | |||| |||||
Sbjct 378028 AGCAGCGAGTTGCGAATCCCGTGCTCCTTGATCTGCTCCTTGAGGGAATCCCACTCCCAC 378087
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTC-GCTGGCGGGGCT 145296
| | |||| |||||| ||||||||| |||||| ||||| || | | ||| | |
Sbjct 378088 AAGTCGGACGGCGTCACGTTCCACATGTCAAACTGCAGGATGCCTTCAGAGGCCGGAGAT 378147
Query 145297 GCCTTGAAAG-GAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAAC-TCGCCTCCAGA 145354
||||||| | | | ||| ||| ||||| ||||| || | |||| ||
Sbjct 378148 CCCTTGAACGTGGA--GTAGGGACCCTCCTCCTTGGCCAGCTC-CACCGACGCCGTCAAG 378204
Query 145355 GCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGC-TTCATCG---CT 145410
||| || || || ||||| ||| ||| |||| ||| |||| | |||
Sbjct 378205 GCGGCGTGGTAGATGGTCTCAAAAATCTGCTTGTTCAGC----TCGCGAGCCTCGGGAGA 378260
Query 145411 CTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGAT 145470
||| | |||||||| ||| | || || ||||| | || || | || || || ||
Sbjct 378261 CTCAAAGGGCATGCGAAGCGCAAGGAAGGCGTCGGCCAAGCCTTGAACACCGACACCAAT 378320
Query 145471 GGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGAT 145530
||| ||||| ||||||||| | | || | || || || | || ||||||
Sbjct 378321 GGGACGATGCCGCATGTTGCTGTTGCGTGCTTCTTGGACGGGGTAGTGGTTGACGTCGAT 378380
Query 145531 AATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAA 145590
|| || || | ||||| || || || || | || ||| ||||| ||||| |
Sbjct 378381 GATCTTGTTGAGATTTCGGACAACCACGCGGGTGACGTCGTGCAGCTTTTGGAAGTCGTA 378440
Query 145591 CCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGC 145650
| | | ||| | ||||| || | ||| | || || | || || || ||
Sbjct 378441 CTTGCCTTGGTCGTAGTCCACAAAGGCGGGCAGGGCAAGGGAGGCAAGGTTGCAGACGGC 378500
Query 145651 CGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGT 145710
||| |||| | | ||| | | ||||||| ||| | ||| | |||||
Sbjct 378501 AACCTCGTCGGGGGCCGAGTACTCGATAATCTCGGTGCAGAGGTTGGAGCTGCGAATGGT 378560
Query 145711 TCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCC 145770
||||| || | ||| || || ||||||||||| |||||||| ||||| | ||
Sbjct 378561 TCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAATGATCCTTGTACAGCATAAAGGGGTT 378620
Query 145771 GCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACCTGCTG 145830
||||||||| ||| | ||| | ||| | || | ||| || || | ||
Sbjct 378621 GCCAGTCTCGGTCTGAGCCTCGAGGATCGAGTACCACAGCTTCTGGGCGCGGATTGTCTT 378680
Query 145831 CTGGTAGCGGCCCTCTTCTTCGTA--TTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAG 145888
|| ||||| || ||||| |||| | | || |||||||| || ||||||
Sbjct 378681 GCGGCCACGGCCTTCGCGCTCGTACTTTTCATACAAAG--CCTCAAACTCGTCGCCGTAG 378738
Query 145889 CAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTG 145948
|| |||| || || || || | |||||| ||||| || | ||| |||| || | |
Sbjct 378739 CAGTCGGCGAGCCCAGGGCATTCGTTGGGGCACATGAGGGTCCAGTCGCCATTCTTCTCG 378798
Query 145949 ACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAA 146008
|| |||| ||| || | || || | ||||||||| | | |||||| || |
Sbjct 378799 ACACGCTTCATGAAGAGGTCGGGGATCCACAGCGCAAGGAAGAGGTCGCGAGCGCGGACT 378858
Query 146009 TCCTCAGCACCCATGTTTCGCT-TCAAATTAAGCACACTATAGATGTCCGCGTGCCACGG 146067
||||| || || ||| | | | || ||| | | ||| || |||||||| ||
Sbjct 378859 TCCTC-CTTGCCGTGGTTCTTTCTGAGATCAAGGAATTCAAAGACATCGGCGTGCCAGGG 378917
Query 146068 TTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACGTAC 146124
|| | |||| ||||| ||| || ||| ||||| || ||||| |||| | |
Sbjct 378918 CTCCAGGTAGATGGCGAAGGCGCCCGGTCGCTTGTTGCCGCCTTGGTCGACGTATCTGGC 378977
Query 146125 CATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGAGTT 146184
||||||| ||||| |||| |||||| |||||||| | | |||||| || |
Sbjct 378978 AGTGTTGTTGAAGACTCGCAGCATGGGAACGACGCCGTTCGAGGTGCCGTTGGTGCCGGC 379037
Query 146185 TATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCGTACTT 146244
|| || ||| | || | || || || |||| ||||| ||||||| | ||
Sbjct 379038 AATGTAGGATCCGGTAGCACGAATGCGGTGGACGTTCAGGCCGATACCGCCGGCCATTTT 379097
Query 146245 GGATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--GCTTCG 146301
|| || ||||| |||| ||| || ||||||||||| || ||||| || ||||
Sbjct 379098 AGAAATCATGGCGCAAGTC-TTGAGAGTGTCGTAGATGCCCTCGATGCTGTCTTCCTTC- 379155
Query 146302 AATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAACGT 146361
||| ||| || ||||||||| | | ||| | ||||| ||||| ||| | ||
Sbjct 379156 -ATGTCGACGAGGAAGCACGAGGAAAGCTGACACTGAGGCGTGCCCGCGTTGAAGAGGGT 379214
Query 146362 CGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCGATACGTTTCGATAGCGTCTTG 146421
|| ||||| || || | ||| | | ||| | || ||||| | || |
Sbjct 379215 AGGTGAGGCGTGGGTGAAGAATTTACTGGACATGAGGTTGTAGGTTTCCAGGACGCGCTC 379274
Query 146422 AATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCTC 146478
||||| ||| || ||||| | ||| || ||||||| |||||| || || || ||
Sbjct 379275 AATGTTGTCTCCCCAGATGCCGACAGCAACACGCATGATCATGTGCTGAGGTCGTTC 379331
>seq3
Length=1259731
Score = 136 bits (150), Expect = 4e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||||||||||| |||||||| || || | ||| |||||| || |||||||| |||
Sbjct 602965 GCCACCGCGCAGGCGCAGCACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGC 603024
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| |||||| ||||| ||||||||||| || |||| | ||||||||||| || ||
Sbjct 603025 CAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGG 603084
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 603085 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCAC 603144
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | ||| || || || || || || ||||||||||||||
Sbjct 603145 CTCGAGGGTGATGGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 603192
>seq31
Length=345369
Score = 125 bits (138), Expect = 7e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| |||| || ||||| | || | ||||||||||||||||||||||| |||
Sbjct 218534 GCCACCACGCAGGCGGAGCACCAGGTGCAACGTCGACTCCTTTTGAATGTTGTAGTCGGC 218475
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||| | | ||||| |||||||| || || |||| | |||||||| || |||||
Sbjct 218474 TAGGGTTCTCCCATCCTCAAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGATCAGGAGG 218415
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || ||||| |||||| ||| | | || | ||||| | ||||| |
Sbjct 218414 AATGCCCTCCTTGTCTTGAATTTTCGACTTCACATTATCAATGGTATCAGACGACTCCAC 218355
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|||| || | ||| || ||||| || || || |||||||||||||||
Sbjct 218354 CTCGAGCGTGATGGTCTTCCCGGTCAGCGTCTTGACGAAAATCTGCATG 218306
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || |||| || || || | ||| | ||| || ||||| || |||||||| ||| |
Sbjct 217849 CCGCCACGCAGGCGAAGAACCAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCC 217790
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || ||||| || || || |||| || ||||||||||| || |||
Sbjct 217789 AGGGTGCGGCCATCTTCGAGCTGTTTACCAGCAAAGATCAAGCGCTGCTGGTCGGGCGGG 217730
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| |||||| ||||| | || | ||| || | ||||| |
Sbjct 217729 ATGCCCTCCTTGTCTTGAATTTTCGACTTGACATTGTCGATAGTGTCAGAAGACTCCACC 217670
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|||| ||| | ||| || ||||| || || |||||||| || ||||||
Sbjct 217669 TCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTTACGAAGATTTGCATG 217622
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| ||||| | ||||||||| | || | ||| |||||||| || |||||||| |||
Sbjct 218306 GCCGCCGCGGAGACGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 218247
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| || || |||||| ||||||||||| || |||| | ||||||||||| || ||
Sbjct 218246 CAATGTTCGTCCGTCCTCGAGCTGCTTGCCGGCAAAGATAAGTCGCTGCTGGTCGGGGGG 218187
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||| ||||| || ||| ||||| | || | || || | ||||| |
Sbjct 218186 AATCCCTTCCTTGTCTTGAATCTTCGACTTGACGTTGTCAATGGTGTCTGACGACTCAAC 218127
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | || | ||||| || || || || || || || || ||||||
Sbjct 218126 TTCCAGCGTGATTGTTTTTCCCGTCAGTGTCTTGACAAAGATTTGCATG 218078
>seq25
Length=408197
Score = 107 bits (118), Expect = 2e-18
Identities = 133/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| ||||||||||| ||| || ||| || ||||| ||||||||||| || |||
Sbjct 312411 CCTTCTGAATGTTGTAGTCGGCCAGGGTTCGGCCATCCTCCAGCTGCTTGCCAGCAAAGA 312470
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| |||||||||||||| |||||||| || || ||||| ||| || ||||| | |
Sbjct 312471 TCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 312530
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || |||| |||||||| |||| || | ||| || || || || || || || |
Sbjct 312531 CGATCGTGTCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCCGTCAGGGTCTTCACAA 312590
Query 131225 AA 131226
||
Sbjct 312591 AA 312592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472011979877760
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