Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29] 139 sequences; 33,567,624 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq36 91.5 2e-13 >seq36 Length=277325 Score = 91.5 bits (100), Expect = 2e-13 Identities = 111/150 (74%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 15050 CCCG-AGATTGGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCACGTGCGGCATGAT 15108 |||| ||||||||||||||||| ||| || | |||||||||||| || ||| Sbjct 33586 CCCGCAGATTGGCGACAAGTTTGCGTCTCGTCACGGACAAAAGGGCACGATTGGTGTGAC 33527 Query 15109 TTTCCCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCAA 15168 | || ||||| |||||||||||||| | ||| | ||||| ||||| |||||||| Sbjct 33526 GTACCGGCAGGAGGACATGCCCTTTACACGGGAAGGGGTCACGCCAGACATCATCATCAA 33467 Query 15169 CCCCAACTGCATCCCGTCCCGCATGACCAT 15198 ||| || ||| ||||| || ||||| || Sbjct 33466 CCCGCACGCCATTCCGTCGCGAATGACAAT 33437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611390937706400