Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29]
139 sequences; 33,567,624 total letters
Query= NC_008187.1
Length=191100
Score E
Sequences producing significant alignments: (Bits) Value
seq36 91.5 2e-13
>seq36
Length=277325
Score = 91.5 bits (100), Expect = 2e-13
Identities = 111/150 (74%), Gaps = 1/150 (1%)
Strand=Plus/Minus
Query 15050 CCCG-AGATTGGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCACGTGCGGCATGAT 15108
|||| ||||||||||||||||| ||| || | |||||||||||| || |||
Sbjct 33586 CCCGCAGATTGGCGACAAGTTTGCGTCTCGTCACGGACAAAAGGGCACGATTGGTGTGAC 33527
Query 15109 TTTCCCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCAA 15168
| || ||||| |||||||||||||| | ||| | ||||| ||||| ||||||||
Sbjct 33526 GTACCGGCAGGAGGACATGCCCTTTACACGGGAAGGGGTCACGCCAGACATCATCATCAA 33467
Query 15169 CCCCAACTGCATCCCGTCCCGCATGACCAT 15198
||| || ||| ||||| || ||||| ||
Sbjct 33466 CCCGCACGCCATTCCGTCGCGAATGACAAT 33437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 611390937706400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |