Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29]
139 sequences; 33,567,624 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq31 98.7 8e-16
seq25 82.4 6e-11
>seq31
Length=345369
Score = 98.7 bits (108), Expect = 8e-16
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||||||||| || | | ||| | ||| | || ||||| || || |||||||| |||
Sbjct 217852 ATACCGCCACGCAGGCGAAGAACCAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCG 217793
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || |||||| || ||||||||||| |||| | ||||| ||||| ||
Sbjct 217792 GCCAGGGTGCGGCCATCTTCGAGCTGTTTACCAGCAAAGATCAAGCGCTGCTGGTCGGGC 217733
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| ||||| || ||||| ||| || || | | || | ||||| | || ||
Sbjct 217732 GGGATGCCCTCCTTGTCTTGAATTTTCGACTTGACATTGTCGATAGTGTCAGAAGACTCC 217673
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 114384
|| || | ||| | || || ||||| || || ||||| || || |||||||
Sbjct 217672 ACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTTACGAAGATTTGCATGG 217621
Score = 98.7 bits (108), Expect = 8e-16
Identities = 141/199 (71%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244
||| || || |||||||||||||| ||| | || | ||| ||||| || |||||
Sbjct 218504 CGTCGACTCCTTTTGAATGTTGTAGTCGGCTAGGGTTCTCCCATCCTCAAGCTGCTTACC 218445
Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304
||| ||||||| ||||| || || ||||||||||| || ||||| ||| || ||
Sbjct 218444 AGCAAAGATGAGTCGCTGCTGATCAGGAGGAATGCCCTCCTTGTCTTGAATTTTCGACTT 218385
Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364
| | |||| ||| || | || || || || | || | || || |||||||| ||
Sbjct 218384 CACATTATCAATGGTATCAGACGACTCCACCTCGAGCGTGATGGTCTTCCCGGTCAGCGT 218325
Query 114365 TTTTACAAAAATCTGCATG 114383
|| || ||||||||||||
Sbjct 218324 CTTGACGAAAATCTGCATG 218306
>seq25
Length=408197
Score = 82.4 bits (90), Expect = 6e-11
Identities = 126/180 (70%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254
|| ||||||||||| ||| || || || ||| || || || || ||||| ||||
Sbjct 312413 TTCTGAATGTTGTAGTCGGCCAGGGTTCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATC 312472
Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314
| |||||| ||||| ||||| ||||| || ||||| ||||| || | | ||
Sbjct 312473 AAACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 312532
Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374
| ||||||| ||| ||||| || | || | || ||||| ||||| || || ||||||
Sbjct 312533 ATCGTGTCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAA 312592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420133688266068
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |