Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29]
139 sequences; 33,567,624 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq32 89.7 1e-12
>seq32
Length=314566
Score = 89.7 bits (98), Expect = 1e-12
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 243544 GACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAA 243603
|| ||| | || ||| ||| | ||||||||||| ||| ||| || |||||||||
Sbjct 225156 GAGGCTCTGCCGTGCGCTCTTCTCGGCATGAACTCCACACTGATGAAGCAATACATCGAA 225097
Query 243604 TTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAAC 243663
||||| ||||||||| | || | || || || |||| || |||||||| | |||
Sbjct 225096 TTCGTTGCCGACCGCCTGTTGGTTGCTCTCGGGAATGAAAAGGTGTACAAGACAGCGAAT 225037
Query 243664 CCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGT 243723
|| |||| ||||||||| || || || || || || ||||| || || |||||
Sbjct 225036 CCGTTTGATTTTATGGAGAATATCTCCCTGGGTGGCAAGACCAACTTTTTTGAGAAGCGA 224977
Query 243724 GTCAGTGATTATCA-ACGCCCTGGTGTGATG 243753
|| |||| || || | | || ||||| |||
Sbjct 224976 GTTGGTGAATACCAGAAGGCC-GGTGTCATG 224947
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102878035839650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |