Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29]
139 sequences; 33,567,624 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq1 275 6e-69
>seq1
Length=1559860
Score = 275 bits (304), Expect = 6e-69
Identities = 1068/1659 (64%), Gaps = 32/1659 (2%)
Strand=Plus/Minus
Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783
||||||| ||||| || |||||| ||||| ||||| ||| |||| |||| | || |
Sbjct 379391 TACTTTGGTTTCAAGACGCTGGAGCGATCGTATCTCCTGAAGCTGGACGGCAAGATTGTC 379332
Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCG 93843
|| ||||| || || || | ||||| || || |||| || || || |||| |
Sbjct 379331 GAACGACCTCAGCACATGATCATGCGTGTTGCTGTCGGCATCTGGGGAGACAACATTGAG 379272
Query 93844 AATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACC 93903
|| || | | || |||| || | ||| ||| | || |||
Sbjct 379271 CGCGTCCTGGAAACCTACAACCTCATGTCCAGTAAATTCTTCACCCACGCCTCACCTACC 379212
Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GACGAACAA 93962
|| ||||||||||| || || | ||| | || ||||| ||||| | ||| | ||
Sbjct 379211 CTCTTCAACGCGGGCACGCCTCAGTGTCAGCTTTCCTCGTGCTTCCTCGTCGAC-ATGAA 379153
Query 93963 GGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATA 94022
|| ||| |||| || || | ||||| |||||| || || | || || |||
Sbjct 379152 GGAAGACAGCATCGAGGGCATCTACGACACTCTCAAGACTTGCGCCATGATTTCTAAAAT 379093
Query 94023 CGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGG 94082
|| || || ||||| | | |||||| | | ||||| | || |||||||| |||
Sbjct 379092 GGCCGGCGGTATCGGCCTGAACGTCCACCGCATTCGTGCTACCGGATCCTACATTGCCGG 379033
Query 94083 TACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCG 94142
||||| |||||||| |||||| |||| || ||||| || |||||||||||| | || |
Sbjct 379032 CACCAACGGCACCTCGAACGGCGTCGTTCCCATGCTGCGAGTCTTCAACAACACTGCCAG 378973
Query 94143 CTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTG 94202
||||| ||||| || || | | | ||| | ||||| |||| || ||||||||
Sbjct 378972 ATACGTCGACCAAGGCGGCAACAAGCGACCGGGCGCCTTCGCCATCTACCTGGAGCCCTG 378913
Query 94203 GCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAG 94262
|||||| || || | ||| | || || |||||||||||||||| || | |
Sbjct 378912 GCACGCCGATGTCTTTGAATTCCTTGATCTCAGAAAGAACCACGGCAAGGAGGAAGTCCG 378853
Query 94263 GGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAA 94322
|| | ||||||||| || || ||| | || ||||| || ||||| || ||||||||
Sbjct 378852 CGCTCGCGACCTCTTCCTTGCGCTGTGGATCCCCGACCTCTTCATGAAGCGTGTCGAGAA 378793
Query 94323 AAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC-GTTTGTG 94381
|| || ||||| || | || ||||| ||||| || || || ||||| | | |
Sbjct 378792 GAATGGCGACTGGACCCTCATGTGCCCCAACGAATGCCCTGGGCTCGCCGACTGCTACGG 378733
Query 94382 GATCGCGTTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCAAGGCCAGGAAGGTT 94440
|| | ||||| | ||||||| ||||| || ||| | |||| | |||
Sbjct 378732 CGACGAG-TTTGAGGCTTTGTATGAAAAGTACGAGCGCGAAGGCCGTGGCC-GCAAGACA 378675
Query 94441 ATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCC 94500
|| || |||||||||| | |||| | || | ||| ||||| || | |||
Sbjct 378674 ATCCGCGCCCAGAAGCTGTGGTACTCGATCCTCGAGGCTCAGACCGAGACTGGCAACCCC 378615
Query 94501 TACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATC 94560
| || ||| |||||| | |||| ||| ||||||| || || | || ||
Sbjct 378614 TTTATGCTGTACAAGGATCATTGCAACAGGAAGAGCAACCAGAAGAACTTGGGAACCATT 378555
Query 94561 AAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTG 94620
||||| || || |||||||||||| ||||||| | | || |||||| |||| ||
Sbjct 378554 CGCAGCTCCAACCTCTGCACCGAGATTATCGAGTACTCGGCCCCCGACGAGGTTGCCGTC 378495
Query 94621 TGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCTACTGCT 94680
|| ||||| | |||| | |||| || | || ||| | || ||| | | ||
Sbjct 378494 TGCAACCTTGCCTCCCTTGCCCTGCCCGCCTTTGTG------GACT--ACGACCAAGGC- 378444
Query 94681 TCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAACCTGAACAGG 94740
|| ||| | | |||| || || | | | | ||| || || |||| |
Sbjct 378443 AAGTACGACTTCCAAAAGCTGCACGACGTCACCCGCGTGGTTGTCCGAAATCTCAACAAG 378384
Query 94741 GTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATCGG 94800
| |||||| ||| ||||||||||| || || ||| ||| || ||||||
Sbjct 378383 ATCATCGACGTCAACCACTACCCCGTCCAAGAAGCACGCAACAGCAACATGCGGCATCGT 378324
Query 94801 CCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTAC 94860
||||| || |||| || || || || || ||||| | | | | || ||||||
Sbjct 378323 CCCATTGGTGTCGGTGTTCAAGGCTTGGCCGACGCCTTCCTTGCGCTTCGCATGCCCTTT 378264
Query 94861 GACTCTGTCGACGC-GGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTACGGGGC 94919
|| ||| ||| || ||| | |||| | | || || || | ||| || ||| ||
Sbjct 378263 GAGTCTCCCGAGGCTCGCGAG-CTGAACAAGCAGATTTTTGAGACCATCTACCACGCCGC 378205
Query 94920 CATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCGTTCCGCGG 94979
| ||| || || | |||||| ||| | || || || ||||| ||
Sbjct 378204 CTTGACGGCGTCGGTGGAGCTGGCCA---AGGAGGAGGGTCCCTACTCCACGTTCAAGGG 378148
Query 94980 AT---CGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGG 95036
|| || ||| ||| ||||| | ||||| ||| | ||| |||| ||| || |
Sbjct 378147 ATCTCCGGCCTCTGAA---GGCATCCTGCAGTTTGACATGTGGAACGTGACGCCGTCCGA 378091
Query 95037 TCTGTACGACTGGGA--AGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCG 95094
||| || ||||| ||| | | || || | | | ||||| | ||| ||
Sbjct 378090 CTTGTGGGAGTGGGATTCCCTCAAGGAGCAGA--TCAAGGAGCACGGGATTCGCAACTCG 378033
Query 95095 CTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCG 95154
||||| | || |||||||||||||| |||||| ||||||| || |||||||||||||
Sbjct 378032 CTGCTGCTCGCGCCCATGCCCACGGCGTCCACGTCGCAGATTCTGGGCAACAACGAGTGC 377973
Query 95155 TTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTC 95214
||||| |||| ||| |||||| | ||| | | || || || || || || |||| |||
Sbjct 377972 TTCGAGCCCTACACGTCCAACATTTACCAGCGACGCGTCCTGGCGGGCGAGTTCCAGGTC 377913
Query 95215 ATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTGACAAGGTCAA 95273
||||| || || ||| || | || | ||||| ||||| ||| | ||
Sbjct 377912 GTCAACCCATGGCTTCTCAAGGATCTCGTCGAC-ATGGGTCTGTGGTCAGACGCCATGAA 377854
Query 95274 GAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACAT 95333
||| | | | || |||||||| ||||||||||||| | || || | || |
Sbjct 377853 GAATCGCATCATTGCCGAGAACGGCTCGATCCAGAACATCCCCAACATTCCCGGCGAGGT 377794
Query 95334 CAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372
||||| || |||||||| || ||||| || |||||||
Sbjct 377793 AAAGGCTCTGTACAAGACGGTCTGGGAAATTTCGCAGCG 377755
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722340418440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |