Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29]
139 sequences; 33,567,624 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq1 205 1e-47
seq32 93.3 5e-14
seq14 93.3 5e-14
>seq1
Length=1559860
Score = 205 bits (226), Expect = 1e-47
Identities = 1009/1583 (64%), Gaps = 35/1583 (2%)
Strand=Plus/Minus
Query 111526 AGAGAGACTACGACTTTGGTTATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCAAA 111585
||||||||| | ||| | || |||||| ||||||| || ||| | || |||| |
Sbjct 379411 AGAGAGACTTCAACTATCAGTACTTTGGTTTCAAGACGCTGGAGCGATCGTATCTCCTGA 379352
Query 111586 GACTGGATGGTGTCTTGATGGAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTA 111645
||||| || | | ||| || ||| ||||| ||||||| || || |||| |
Sbjct 379351 AGCTGGACGGCAAGATTGTCGAACGACCTCAGCACATGATCATGCGTGTTGCTGTCGGCA 379292
Query 111646 TCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGT 111705
|| || || | ||||| || |||| || ||| || |||||| || | |
Sbjct 379291 TCTGGGGAGACAACATTGAGCGCGTCCTGGAAACCTACAACCTCATGTCCAGTAAATTCT 379232
Query 111706 TCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTT 111765
||| |||||| |||| |||||||||||||| || || || || | ||| |
Sbjct 379231 TCACCCACGCCTCACCTACCCTCTTCAACGCGGGCACGCCTCAGTGTCAGCTTTCCTCGT 379172
Query 111766 GTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAAT 111825
| ||||| | | | ||||| || ||| | ||||| |||| |||||||| |
Sbjct 379171 GCTTCCTCGTCGACATGAAGGAAGACAGCATCGAGGGCATCTACGACACTCTCAAGACTT 379112
Query 111826 GTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCA 111885
| ||| || || || ||| || |||||||| || || |||| | | || |
Sbjct 379111 GCGCCATGATTTCTAAAATGGCCGGCGGTATCGGCCTGAACGTCCACCGCATTCGTGCTA 379052
Query 111886 ACAAGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCG 111945
| || ||| || || || || || | || | |||| ||||| || |
Sbjct 379051 CCGGATCCTACATTGCCGGCACCAACGGCACCTCGAACGGCGTCGTTCCCATGCTGCGAG 378992
Query 111946 TATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTC--GCAA--GGGATCTATC 112001
| || ||| ||| || | || || |||||| || | | || | ||| | ||
Sbjct 378991 TCTTCAACAACACTGCCAGATACGTCGACCAAGGCGG-CAACAAGCGACCGGGCGCCTTC 378933
Query 112002 GCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAAC 112061
|| |||| || ||||| |||||||| ||| || | || |||||||| | | |||
Sbjct 378932 GCCATCTACCTGGAGCCCTGGCACGCCGATGTCTTTGAATTCCTTGATCTCAGAAAGAAC 378873
Query 112062 CAAGGTGATGAGGAGG--CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATC 112119
|| || | ||||| | |||| | ||||| |||||| || || ||||| || || |
Sbjct 378872 CACGGCAAGGAGGAAGTCCGCGCT--CGCGACCTCTTCCTTGCGCTGTGGATCCCCGACC 378815
Query 112120 TCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCA 112178
||||||||||| | || ||| ||| |||| | ||| | ||| | || || || || ||
Sbjct 378814 TCTTCATGAAGCGTGTCGAGAAGAATGGCGACTGGACCCTCATGTGCCCCAACGAATGC- 378756
Query 112179 CCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAA 112238
|| || ||| |||| | || || |||||||| || | || ||||||||||
Sbjct 378755 CCTGGGCTCGCCGACTGCTACGGCGACGAGTTTGAGGCTTTGTATGAAAAGTACGAGCGC 378696
Query 112239 GAAAGTCG-GGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGT 112296
||| | || ||| | ||| | | || | || | ||||| | | || ||| ||
Sbjct 378695 GAAGGCCGTGGCCGC-AAGACAATCCGCGC-CCAGAAGCTGTGGTACTCGATCCTCGAGG 378638
Query 112297 CTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTA 112356
|||| ||||||||||| | || | |||||| ||||| || || ||| ||||| |
Sbjct 378637 CTCAGACCGAGACTGGCAACCCCTTTATGCTGTACAAGGATCATTGCAACAGGAAGAGCA 378578
Query 112357 ATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTA 112416
| || ||||| ||||| || || ||||||||||| || || || | || |
Sbjct 378577 ACCAGAAGAACTTGGGAACCATTCGCAGCTCCAACCTCTGCACCGAGATTATCGAGTACT 378518
Query 112417 CAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGG 112476
| | | || ||| || || || ||||| || || | || || ||| | |||||
Sbjct 378517 CGGCCCCCGACGAGGTTGCCGTCTGCAACCTTGCCTCCCTTGCCCTGCCCGCCTTTGTGG 378458
Query 112477 ATCCAGAGACAAAGACA--TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCAC 112534
| | ||| ||| || | || | |||| || ||||| || || ||
Sbjct 378457 A--CTACGACCAAGGCAAGTACGACTTCCAAAAGCTGCACGACGTCACCCGCGTGGTTGT 378400
Query 112535 AAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATC 112594
||| || |||| | || || || |||||||| | || || ||
Sbjct 378399 CCGAAATCTCAACAAGATCATCGACGTCAACCACTACCCCGTCCAAGAAGCACGCAACAG 378340
Query 112595 TAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCT 112654
|| ||| | || ||||| |||||| ||||||| ||||| | || || | ||| ||
Sbjct 378339 CAACATGCGGCATCGTCCCATTGGTGTCGGTGTTCAAGGCTTGGCCGACGCCTTCCTTGC 378280
Query 112655 TTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGAC 112714
|||| | ||||| || ||| || || | || || || ||||||||
Sbjct 378279 GCTTCGCATGCCCTTTGAGTCTCCCGAGGCTCGCGAGCTGAACAAGCAGATTTTTGAGAC 378220
Query 112715 AATGTATCACGCCGCTCTTGA-GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATG 112773
|| || |||||||| ||||| |||| |||| |||| ||| || ||||| ||
Sbjct 378219 CATCTACCACGCCGC-CTTGACGGCGTCGGTGGAGCTGGCCAAGGAGGAGGGTCCCTACT 378161
Query 112774 AAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTG 112833
|| || |||| ||||| || || |||| | || || ||||| |||| |||| |||
Sbjct 378160 CCACGTTCAAGGGATCTCCGGCCTCTGAAGGCATCCTGCAGTTTGACATGT-GGAACGTG 378102
Query 112834 A----GACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGT 112889
| | || | ||| | || ||||| | |||||||| | ||||||||| | ||
Sbjct 378101 ACGCCGTCCGA-CTT--GTGGGAGTGGGATTCCCTCAAGGAGCAGATCAAGGAGCACGGG 378045
Query 112890 CTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGT 112949
|||| ||| || || | || || ||||| || || ||||| | || || ||||
Sbjct 378044 ATTCGCAACTCGCTGCTGCTCGCGCCCATGCCCACGGCGTCCACGTCGCAGATTCTGGGC 377985
Query 112950 AATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGA 113009
|| || || ||||| || ||||||||| | ||||| || | | || | ||| |||||
Sbjct 377984 AACAACGAGTGCTTCGAGCCCTACACGTCCAACATTTACCAGCGACGCGTCCTGGCGGGC 377925
Query 113010 GAGTTTGTGATTGTCAAC---AAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGG 113066
||||| | | |||||| || |||| |||| ||| || || ||||| |||
Sbjct 377924 GAGTTCCAGGTCGTCAACCCATGGCTTCTCAAGGAT---CTCGTCGACATGGGTCTGTGG 377868
Query 113067 TCCAAGGATATGAAGGATCTCAT 113089
|| | | |||||| ||| |||
Sbjct 377867 TCAGACGCCATGAAGAATCGCAT 377845
>seq32
Length=314566
Score = 93.3 bits (102), Expect = 5e-14
Identities = 100/130 (77%), Gaps = 2/130 (2%)
Strand=Plus/Minus
Query 102203 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAG 102261
||| ||||| ||||||||| |||| | ||| ||| | || | ||||||||||||||| |
Sbjct 225382 TGTCGAGGGCATCTTCTTCAGTGGTGCATTC-GCGTCCATCTTTTGGCTCAAGAAGCGCG 225324
Query 102262 GTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACC 102321
| |||||||| || || |||||| ||||| || || || ||||||||||| | |||
Sbjct 225323 GCCTCATGCCCGGGCTTACCTTCTCAAACGAACTCATATCCCGTGACGAGGGTTTGCACA 225264
Query 102322 AAGAGTTTGC 102331
|| |||||
Sbjct 225263 CCGACTTTGC 225254
Score = 84.2 bits (92), Expect = 3e-11
Identities = 92/122 (75%), Gaps = 3/122 (2%)
Strand=Plus/Minus
Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 101873
||||| || |||||| |||| || || ||||||||| |||| ||||| | || | ||
Sbjct 225837 TGGACAGCCGAAGAGATAGACCTGTCCAAGGATTTGCACGACTGGAATAATCGCCTGAAC 225778
Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933
|| |||||||| | ||||| ||||| ||||||||||||||| || ||||| ||
Sbjct 225777 GACGATGAAAAGTATTTCATTTCTCACATCTTGGCATTCTTTGCTGCCTCGGATGGCATC 225718
Query 101934 GT 101935
||
Sbjct 225717 GT 225716
>seq14
Length=615434
Score = 93.3 bits (102), Expect = 5e-14
Identities = 160/228 (70%), Gaps = 6/228 (3%)
Strand=Plus/Plus
Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123
||| || || || || ||||||| ||||||||| ||||| ||| | | |||| ||
Sbjct 203751 GGCGTCGATTTCGTCGATGAAGATGATGCATGGAGCATTTTTGCGGCCCTCGGCAAACAG 203810
Query 16124 ATCCCGTACACGCTTGGCG--CCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA- 16180
|| | || | ||| || || ||||| |||||||| ||||| || | || ||
Sbjct 203811 GTCTCTGACTC--TTGACGGACCAACACCGACAAACATTTCCACGAATTCTGATCCGCTC 203868
Query 16181 ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 16240
|| || | ||| || || || || || ||| ||||| |||||||| ||||| ||
Sbjct 203869 ACGCTGAA-GAACGGTACGCCGGACTCGCCAGCAGTGGCTTTTGCGAGAAGCGTCTTTCC 203927
Query 16241 CGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288
|||||||| ||| ||||||| ||| || || || |||||||||||
Sbjct 203928 AGTACCTGGAGGACCAGCGAGGATGGCGCCGCGGGGTATCTTGGCGCC 203975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741321460080
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