Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29]
139 sequences; 33,567,624 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq1 217 2e-51
>seq1
Length=1559860
Score = 217 bits (240), Expect = 2e-51
Identities = 1056/1652 (64%), Gaps = 51/1652 (3%)
Strand=Plus/Plus
Query 109414 TAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGTTTG 109473
|| ||||| || || |||||||| |||||| || | ||||| || | || |||
Sbjct 377608 TAGTACATGCCAGTCTTGAGACCCAGCTTCCACCCGGCAAAGTGCATCGACGTGATCTTG 377667
Query 109474 GAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGACCA 109533
| || || || ||| | ||| | ||||| ||||| ||||| || |||
Sbjct 377668 CCCATGGTTGGGTCCTTCATGTGAATGTTGAGAGACTGGGACTGGTCGATAAAGGCACCG 377727
Query 109534 CGATCAGCCGCCATGTCGATGATACACTTTTGGCT----AATTTCCCAGACAGTCTTGTA 109589
|| || || ||||| | | ||| | ||| |||||||||||| ||||||||
Sbjct 377728 CGGTCGGCGGCCATCTGCAC----CACATGACGCTGCGAAATTTCCCAGACCGTCTTGTA 377783
Query 109590 CAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTCAC 109649
|| | ||| | || ||||||||| |||||| || || ||||| | |
Sbjct 377784 CAGAGCCTTTACCTCGCCGGGAATGTTGGGGATGTTCTGGATCGAGCCGTTCTCGGCAAT 377843
Query 109650 CATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGTCAACAAG--A 109707
||| ||| |||||| | | ||||| ||||| | | |||||| | | ||| |
Sbjct 377844 GATGCGATTCTTCATGGCGTCTGACCACAGACCCATGTCGACGAGATCCTTGAGAAGCCA 377903
Query 109708 TGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTG 109767
|| |||||| || || || || || || |||||| |||| ||||| | ||||
Sbjct 377904 TGG--GTTGACGACCTGGAACTCGCCCGCCAGGACGCGTCGCTGGTAAATGTTGGACGTG 377961
Query 109768 TAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGA 109827
||||| ||||| ||||| |||||||| || || || | ||||| || |||||||||||
Sbjct 377962 TAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGGACGCCGTGGGCATGGGC 378021
Query 109828 GCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAA 109887
|| | || || ||| || | || | | ||| | | |||| | | |||||
Sbjct 378022 GCGAGCAGCAGCGAGTTGCGAATCCCGTGCTCCTTGATCTGCTCCTTGAGGGAATCCCAC 378081
Query 109888 TCATAACGACCACTAAATTTAGTC----TCACCATCCCACATATCTGGTTGAAGTACACC 109943
|| |||| || | | | |||| ||| |||| || || || | ||
Sbjct 378082 TC-------CCAC--AAGTCGGACGGCGTCACGTTCC-ACATGTCAAACTGCAGGATGCC 378131
Query 109944 CTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGA 110003
|||| || ||||| |||||||| | ||| | ||||| ||| ||||| |||
Sbjct 378132 TTCAGAGGCCGGAGATCCCTTGAACGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTCCAC 378191
Query 110004 TGAAGCC-TCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAG 110062
|| ||| || || || || || || || ||||||||||| || |||| |||||
Sbjct 378192 CGACGCCGTCAAG-GCGGCGTGGTAGATGGTCTCAAAAATCTGCTTGTTCAGCTCGCGAG 378250
Query 110063 ACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACAC 110122
||| | | || ||||| | | | || || | || || | || |||||||
Sbjct 378251 CCTCGGGAGACTCAAAGGGCATGCGAAGCGCAAGGAAGGCGTCGGCCAAGCCTTGAACAC 378310
Query 110123 CGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGT 110182
||| ||||||||| |||||| |||||| | || || || |||||||| ||
Sbjct 378311 CGACACCAATGGGACGATGCCGCATGTTGCTGTTGCGTGCTTCTTGGACGGGGTAGTGGT 378370
Query 110183 TGCGGTCGATGACCCGATTGAGATTCTTCGTCA--CAGTCTTCGTGATTTCATGGAGTTT 110240
|| |||||||| | |||||||| | | || || | |||| || || || ||
Sbjct 378371 TGACGTCGATGATCTTGTTGAGATT-TCGGACAACCACGCGG-GTGACGTCGTGCAGCTT 378428
Query 110241 GTCGTAATCGAACGTTTTCGTCTCCTTATTG-ACATATTTGGGGAGAGCAATAGACGCAA 110299
| | | ||| || || | | | || | ||| | ||| || |||| || ||||
Sbjct 378429 TTGGAAGTCGTAC-TTGCCTTGGTCGTAGTCCACAAAGGCGGGCAGGGCAAGGGAGGCAA 378487
Query 110300 GATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGG 110359
| ||||| || | | |||||| | | | ||| || | ||| || || || | |||||
Sbjct 378488 GGTTGCAGACGGCAACCTCGTCGGGGGCCGAGTACTCGATAATCTCGGTGCAGAGGTTGG 378547
Query 110360 AACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGA 110419
| || |||| |||||||||||||| || || |||||| |||||| || |
Sbjct 378548 AGCTGCGAATGGTTCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAATGATCCTTGTACA 378607
Query 110420 GCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCG 110478
|||| | ||| | ||||| || ||||| | || ||| || | | ||| | | || | |
Sbjct 378608 GCATAAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGATCGAGTACCACAGCTTCTG-G 378666
Query 110479 GCGGGGACAG--TTGCGTTAGCGA-GACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCA 110535
||| ||| | ||||| || | | ||||| ||||||||| ||||| |||||
Sbjct 378667 GCGCGGATTGTCTTGCG---GCCACGGCCTTCGCGCTCGTACTTTTCATACAAAGCCTCA 378723
Query 110536 AATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTT-GTCGGGACAGAAGAGGGACCA 110594
|| || | ||||| || | || ||| || || || ||| || | ||||| |||
Sbjct 378724 AACTCGTCGCCGTAGCAGTCGGCGAG-CCCAGGGCATTCGTTGGGGCACATGAGGGTCCA 378782
Query 110595 ATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAG 110654
| ||| || ||| || | ||||||||| ||||| || ||||||| ||| ||| ||
Sbjct 378783 GTCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGGATCCACAGCGCAAGGAAGAG 378842
Query 110655 GTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGAT 110714
||| || || | || || | || ||||| | || || | || || | ||
Sbjct 378843 GTCGCGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTTCTGAGATCAAGGAATTCAAAGAC 378902
Query 110715 ATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCC--TTACGACGACCCGCC-TG 110771
||| | |||||| || || || |||| |||| || ||| | | ||||| ||
Sbjct 378903 ATCGGCGTGCCAGGGCTCCAGGTAGATGGCGAAGGCGCCCGGTCGCTTGTTGCCGCCTTG 378962
Query 110772 GTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTG 110831
|| || || | || ||| |||||||| | ||||| |||| | || | ||
Sbjct 378963 GTCGACGTATCTGGCAGTGTTGTTGAAGACTCGCAGCATGGGAACGACGCCGTTCGAGGT 379022
Query 110832 ACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAAT 110891
|| || || || ||| ||| | ||||||||| ||||| | || || ||
Sbjct 379023 GCCGTTGGTGCCGGCAATGTAGGATCCGGTAGCACGAATGCGGTGGACGTTCAGGCCGAT 379082
Query 110892 ACCACCCGCCCACTTACTAAT--TTGTGCACACTCTGTGAGTGTACCATAAATACCATCA 110949
||| || ||| ||| ||| | | ||| | ||| |||| || | || || || ||
Sbjct 379083 ACCGCCGGCCATTTTAGAAATCATGGCGCA-AGTCT-TGAGAGTGTCGTAGATGCCCTCG 379140
Query 110950 ATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCC 111009
|| ||| |||| || | | || ||||| || || | |||| ||||||| |||
Sbjct 379141 ATGCTGTCTTCCTTCATGTCGACGAGGAAGCACGAGGAAAGCTGACACTGAGGCGTGCCC 379200
Query 111010 GCATTGAAGAGTGTAGGTGTCGCATGAATGAA 111041
|| |||||||| ||||||| || || ||||
Sbjct 379201 GCGTTGAAGAGGGTAGGTGAGGCGTGGGTGAA 379232
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588974976654200
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