Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29]
139 sequences; 33,567,624 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq14 87.8 2e-12
>seq14
Length=615434
Score = 87.8 bits (96), Expect = 2e-12
Identities = 180/262 (69%), Gaps = 8/262 (3%)
Strand=Plus/Plus
Query 9371 GGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAG 9430
||| || || || || ||||||| || ||||| ||||| |||| | |||| ||
Sbjct 203751 GGCGTCGATTTCGTCGATGAAGATGATGCATGGAGCATTTTTGCGGCCCTCGGCAAACAG 203810
Query 9431 ATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 9489
|| | || ||| | || ||||| |||||||| ||||| || | || || ||
Sbjct 203811 GTCTCTGACTCTTGACGGACCAACACCGACAAACATTTCCACGAATTCTGATCCGCTCAC 203870
Query 9490 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9549
|| | ||| || || || || || ||| ||||| |||||||| ||||| || |
Sbjct 203871 GCTGAA-GAACGGTACGCCGGACTCGCCAGCAGTGGCTTTTGCGAGAAGCGTCTTTCCAG 203929
Query 9550 TACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC--ACTTC-CAAAGT 9606
||||||| ||| ||||||| ||| || || || ||||||||||| |||| | || |
Sbjct 203930 TACCTGGAGGACCAGCGAGGATGGCGCCGCGGGGTATCTTGGCGCCCAGCTTCTCGAACT 203989
Query 9607 ATCTCTCAGGTTGCTTGAGAAA 9628
|||| || |||||||| ||
Sbjct 203990 ---TCTCCGGCTGCTTGAGGAA 204008
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589979774908360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |