Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29] 139 sequences; 33,567,624 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1 374 2e-98 seq32 131 3e-25 >seq1 Length=1559860 Score = 374 bits (414), Expect = 2e-98 Identities = 927/1389 (67%), Gaps = 41/1389 (3%) Strand=Plus/Plus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | |||||| || || | || || | | |||||||| ||| || |||||| Sbjct 377905 GGGTTGACGACCTGGAACTCGCCCGCCAGGACGCGTCGCTGGTAAATGTTGGACGTGTAG 377964 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||||| || ||||||||| ||||||||||| | ||| || ||||||||||| || Sbjct 377965 GGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGGACGCCGTGGGCATGGGCGCG 378024 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCC--GAAGCTCTGCCCAGT 213084 | ||| || ||| | | |||||||| ||| | | || || | | |||| | Sbjct 378025 AGCAGCAGCGAGTTGCGAATCCCGTGCTCCTTGATCTG-CTCCTTGAGGGAAT-CCCACT 378082 Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144 |||| | | ||| | | |||||||||||||||||||||||| |||||||| Sbjct 378083 CCCACAAGTCGGACGG---------CGTCACGTTCCACATGTCAAACTGCAGGATGCCTT 378133 Query 213145 T-GCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAG 213203 | ||| | | |||| | | | ||||||||| || | ||||||||||||||| Sbjct 378134 CAGAGGCCGGAGAT-CCCTTGAACGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTCCACC 378192 Query 213204 GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCC 213263 |||||| || ||| |||| ||||||||| ||||| |||| | |||| |||| ||| Sbjct 378193 GACGCCGTCAAGGCGGCGTGGTAGATGGTCTCAAAAATCTGCTTGTTCAGCTCGCGAGCC 378252 Query 213264 TCTGGGGACGTGAAGGGCATCATCATGCGTT-GGAACACATCAGCCAGCCCCTGGACCCC 213322 || || ||| |||||||| | ||| |||| | || |||| || || || || Sbjct 378253 TCGGGAGACTCAAAGGGCATGCGAA-GCGCAAGGAAGGCGTCGGCCAAGCCTTGAACACC 378311 Query 213323 GATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGT 213381 || || ||||| | || | || ||| ||| | || || | | |||||| || Sbjct 378312 GACACCAATGGGACGATGCCGCATGTTGCTGTTGCGTGCT-TCTTGGACGGGGTAGTGGT 378370 Query 213382 TGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACT 213441 || |||||||||||||||||| || ||| |||| |||||| | | ||| || Sbjct 378371 TGACGTCGATGATCTTGTTGAGATTTCGGACAACCACGCGGGTGACGTCGTGCAG---CT 378427 Query 213442 CGTGATTGAACACGTA---GCCCCCGTCCTG---CACAAACTCAGGCAGGGCGATGCTGG 213495 || ||| |||| ||| ||| | |||||| | |||||||| | | || Sbjct 378428 TTTG---GAAGTCGTACTTGCCTTGGTCGTAGTCCACAAAGGCGGGCAGGGCAAGGGAGG 378484 Query 213496 CCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGT 213555 | |||||||| ||||| ||||| | | | | | |||||| || ||||||||||| |||| Sbjct 378485 CAAGGTTGCAGACGGCAACCTCGTCGGGGGCCGAGTACTCGATAATCTCGGTGCAGAGGT 378544 Query 213556 TGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGT 213615 || || || ||||| |||| ||||| ||||| ||| |||| | |||||||| Sbjct 378545 TGGAGCTGCGAATGGTTCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAATGATCCTTGT 378604 Query 213616 AGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACC 213675 | ||||| ||||| || ||||| ||| | | | || ||| | ||| || | | Sbjct 378605 ACAGCATAAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGATCGAGTACCACAGCTTCT 378664 Query 213676 TGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCG 213734 ||| || | || | || ||| | | || |||||||| ||| || | | Sbjct 378665 GGGCGCGGATT----GTCTTGCGGCCACGGCCTTCGCGCTCGTACTTTTCATACAAAGCC 378720 Query 213735 TTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTC 213794 | || |||| ||| || | | || || || || ||| ||||||||| || Sbjct 378721 TCAAACTCGTCGCCGTAGCAGTCGGCGAGCCCAGGGCATTCGTTGGGGCACATGAGGGTC 378780 Query 213795 CAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAA 213853 ||||| || | | |||| ||| | || |||||| ||||| |||| ||||||||| ||| Sbjct 378781 CAGTCGCCATTCTTCTC-GACACGCTTCATGAAGAGGTCGGGGATCCACAGCGCAAGGAA 378839 Query 213854 CAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAA 213913 ||||| | | | || ||| || ||| || | ||||| || || ||||| Sbjct 378840 GAGGTCGCGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTTCTGAGATCAAGGAATTCAAA 378899 Query 213914 GATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCC 213970 || || |||||||| ||||||| ||||||||| |||||||||| || | |||||||| Sbjct 378900 GACATCGGCGTGCCAGGGCTCCAGGTAGATGGCGAAGGCGCCCGGTCGCTTGTTGCCGCC 378959 Query 213971 CTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGA 214030 ||||| || ||||| ||||||||| ||||| | ||| || | ||||| || Sbjct 378960 TTGGTCGACGTATCTGGCAGTGTTGTTGAAGACTCGCAGCATGGGAACGACGCCGTTCGA 379019 Query 214031 CTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCC 214090 |||||||| || || || || || |||| || | | | | | | || || Sbjct 379020 GGTGCCGTTGGTGCCGGCAATGTAGGATCCGGTAGCACGAATGCGGTGGACGTTCAGGCC 379079 Query 214091 TATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGC 214150 || || ||||| || || ||||||||||| | | | ||| || |||||| | Sbjct 379080 GATACCGCCGGCCATTTTAGAAATCATGGCGCAAGTCTTGAGAGTGTCGTAGATGCCCTC 379139 Query 214151 CATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCC 214210 |||||||| || | | || | | |||||| || ||||| | | || ||| Sbjct 379140 GATGCTGTCTTCCTTCATGTCGACGAGGAAGCACGAGGAAAGCTGACACTGAGGCGTGCC 379199 Query 214211 AGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGT 214270 | |||||| || || || ||| ||| | | || || | || | ||| ||||||| Sbjct 379200 CGCGTTGAAGAGGGTAGGTGAGGCGTGGGTGAAGAATTTACTGGACATGAGGTTGTAGGT 379259 Query 214271 CTCCAGGAC 214279 |||||||| Sbjct 379260 TTCCAGGAC 379268 >seq32 Length=314566 Score = 131 bits (144), Expect = 3e-25 Identities = 350/523 (67%), Gaps = 23/523 (4%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || |||| |||||||| ||||| ||||| || ||| ||||| ||||| Sbjct 224962 CTGGTATTCACCAACTCGCTTCTCAAAAAAGTTGGTCTTGCCACCCAGGGAGATATTCTC 225021 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTT-CCAGCA 47957 ||| || || || || | ||| || |||||| | ||| ||| | ||| || Sbjct 225022 CATAAAATCAAACGGATTCGCTGTCTTGTACACCTTT-TCATTCCCGAGAGCAACCAACA 225080 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || || ||| | |||||||||| ||| || ||| ||||||||| | || | Sbjct 225081 GGCGGTCGGCAACGAATTCGATGTATTGCTTCATCAGTGTGGAGTTCATGCCGAGAAGAG 225140 Query 48018 A-CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||||| || ||||| || || || || | ||| || ||||| || | || Sbjct 225141 CGCACGG-CAGAGCCTCCGTCAGGAAATCTTGCTCAATGGTGACGGCATCGGTGATGATT 225199 Query 48077 TGCTTAACGCGGGACTCTGAGG-GTTTG-TTGCGCAGGTGCTTGGCAT---AG---AGCA 48128 | ||| ||| ||| | ||| |||| | |||||| || || |||| Sbjct 225200 T-CTT------GGA---TGATTTGCTTGCTTGCTCTT-TGCTTGAGATGAGAGTGCAGCA 225248 Query 48129 TGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGA 48188 ||| |||||||| ||||||| || ||||| ||| ||||| |||| |||||| | Sbjct 225249 GGCATGCAAAGTCGGTGTGCAAACCCTCGTCACGGGATATGAGTTCGTTTGAGAAGGTAA 225308 Query 48189 GACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGA 48248 | || ||||||| || | || |||||||| || || | |||||| | ||| ||||| Sbjct 225309 GCCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGACGCGAATGCACCACTGAAGA 225368 Query 48249 AGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTG 48308 |||||||||| || || ||||| || | | | |||| || | ||||||| Sbjct 225369 AGATGCCCTCGACAGCGGCGAAGGCAACCAATCGTTGGGCGAAGCTAGACTCCTTGTCTT 225428 Query 48309 AGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 ||||||| | |||||||| ||||| || |||||| || Sbjct 225429 GGATCCAGCGGATGGCCCAGTCGGCCTTTTTACGGATGCAAGG 225471 Score = 95.1 bits (104), Expect = 2e-14 Identities = 179/263 (68%), Gaps = 3/263 (1%) Strand=Plus/Plus Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 ||| |||| || || | |||||| || |||||||||||||||||| | ||| ||| Sbjct 225611 TACGTCTCGGAATGGATATTCTCCATCATGATCTGGAACCCGTAGAAACAACGGGCTTCA 225670 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544 |||||||| || | ||| | ||| | ||| || || ||||| || ||||| || Sbjct 225671 GGAACCTGCACCTCGCCGCTGAACCGCTCAACCAGGTTTTCGTTGACGATGCCATCCGAG 225730 Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGT---GAGAGCA 48601 ||||||||||| || | || || || ||||| || | || | | | || | Sbjct 225731 GCAGCAAAGAATGCCAAGATGTGAGAAATGAAATACTTTTCATCGTCGTTCAGGCGATTA 225790 Query 48602 TTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGT 48661 |||||| | || | || ||| |||||| | ||||| | |||||||| || || Sbjct 225791 TTCCAGTCGTGCAAATCCTTGGACAGGTCTATCTCTTCGGCTGTCCAGAAAGAAGCCTCA 225850 Query 48662 GCTTTTTTGTACATGCCCCATAT 48684 || || |||||||| |||||| Sbjct 225851 GCCTTCTTGTACATTTGCCATAT 225873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531181461760