Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29]
139 sequences; 33,567,624 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq6 145 1e-28
seq1 123 4e-22
seq2 118 2e-20
seq32 113 7e-19
seq84 95.1 2e-13
seq36 91.5 2e-12
>seq6
Length=1035304
Score = 145 bits (160), Expect = 1e-28
Identities = 177/240 (74%), Gaps = 6/240 (3%)
Strand=Plus/Plus
Query 431020 CGCCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGA 431079
|||||||| ||||||||| || ||||||||| ||||||||| | || ||||
Sbjct 761503 CGCCCGAGGCCCGCGGCTTCGTCGAGAACTCGTACCTGCGCGGCCTGACGCCGACCGAGT 761562
Query 431080 TGTTTCTGCACATGATCGGCGGGCGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCG 431139
| || | ||| || | ||| |||||||| ||| ||||||||||||||||||||||||
Sbjct 761563 TCTTCTTCCACGCCATGGCCGGTCGCGAGGGCCTCATCGACACGGCCGTCAAGACGGCCG 761622
Query 431140 AGACGGGCTACATCCAGCGTCGGTGCATCAAATCGATGGAGAGCCTGCAGATCAAGCG-- 431197
||||||||||||||||||| ||| |||| || | ||| ||| || | |||
Sbjct 761623 AGACGGGCTACATCCAGCGGCGGCTGGTCAAGGCGCTCGAGGACCT---GAGCGCGCGGT 761679
Query 431198 -CGGCGGCCTCGTGCGCAACGCCAACGGCGACATTGTCCAGTTTGCCTATGGCGGCGACG 431256
|| ||| ||||||||| | |||||||||||||||||| ||| |||| ||||
Sbjct 761680 ACGACGGGACGGTGCGCAACTCGCTCGGCGACATTGTCCAGTTCCTCTACGGCGAGGACG 761739
Score = 109 bits (120), Expect = 9e-18
Identities = 198/286 (69%), Gaps = 8/286 (3%)
Strand=Plus/Plus
Query 434025 GGCGTGGACGCCGCACGCAGCCACACCAACGACATCAACCGCGTGGCGGCCGTACTGGGC 434084
||||||||| || | |||| | ||||||||||| || | | | | || | |||
Sbjct 763110 GGCGTGGACCCCACCCGCACCTACACCAACGACCTCTGGCAGATTGTCGAGGTCTTTGGC 763169
Query 434085 ATCGAAGCGGCCGTCGCTGT--GCTCTTTTCC--GAGATCAAGGCCGTGATCTCCTTTGA 434140
||||| ||||| ||| || || || || ||| | | |||| | |||||||
Sbjct 763170 ATCGA---GGCCG-CGCGGTCCGCGCTGGTCAAGGAGCTGACCAACGTGCTGGCCTTTGA 763225
Query 434141 CGGCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACACCATGTGCTGTCGCGG 434200
|||| ||||||||||| |||||||| | || ||| | |||| |||| | || ||
Sbjct 763226 CGGCTCCTACGTCAACCACCGCCACATCGCCCTGCTCGTCGACGTCATGACGTACCGGGG 763285
Query 434201 CTCGGTGGTGGCCGTCACGCGGCACGGCTTCAACCGGGCCGACCACGGCTTTCTGTCGCG 434260
| | ||||||||| ||||||||| ||||||| |||||| || ||| |||
Sbjct 763286 CAGCATCTCGGCCGTCACCCGGCACGGCATCAACCGCGCCGACACGGGGGCCCTGATGCG 763345
Query 434261 GGCCTCCTTTGAGGAGACTGTCGACATCCTCTTTGACGCGGCGGCC 434306
|||||| |||||||| ||||| |||||| | || || ||||||
Sbjct 763346 CTGCTCCTTCGAGGAGACGGTCGAGATCCTCCTCGAGGCCGCGGCC 763391
>seq1
Length=1559860
Score = 123 bits (136), Expect = 4e-22
Identities = 328/501 (65%), Gaps = 15/501 (3%)
Strand=Plus/Plus
Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600
|||||||| || | || |||| ||| ||||| || |||||||| || | |||||| ||
Sbjct 378961 TGGTCGACGTATCTGGCAGTGTTGTTGAAGACTCGCAGCATGGGAACGACGCCGTTCGAG 379020
Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660
|||||||||||| || | ||||| || | || || | ||| || | ||||
Sbjct 379021 GTGCCGTTGGTGCCGGCAATGTAGGATCCGGTAGCACGAATGCGGTGGACGTTCAGGCCG 379080
Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720
|| ||||||||| || || || | ||||| | || || || |||||||||||||||
Sbjct 379081 ATACCGCCGGCCATTTTAGAAATCATGGCGCAAGTCTTGAGAGTGTCGTAGATGCCCTCG 379140
Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780
|| ||| |||||||||| | || |||||||| || || | | ||||||
Sbjct 379141 ATGCTGTCTTCCTTCATGTCGACGAGGAAGCACGAGGAAAGCTGACACTGAGGCGTGCCC 379200
Query 2073781 GCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGTG 2073840
|| |||||||| || || | || ||| | | | ||||||| | ||||||
Sbjct 379201 GCGTTGAAGAGGGTAGGTGAGGCGTGGGTGAAGAATTTACTGGACATGAGGTTGTAGGTT 379260
Query 2073841 GCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGACG 2073900
| || |||||| | | | || ||| || || ||||| || ||
Sbjct 379261 TCCAGGACGCGCTCAA-----TGTT----GTC------TCCCCAGATGCCGACAGCAACA 379305
Query 2073901 CGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTAGGAC 2073960
||||||||||||| ||| ||||| ||||| | | || || ||| || || ||
Sbjct 379306 CGCATGATCATGTGCTGAGGTCGTTCGACAATCTTGCCGTCCAGCTTCAGGAGATACGAT 379365
Query 2073961 CGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGATGGCG 2074020
|| ||| ||| | ||||||||| ||| | ||| | ||||| |||||
Sbjct 379366 CGCTCCAGCGTCTTGAAACCAAAGTACTGATAGTTGAAGTCTCTCTCGTAAACAATGGCA 379425
Query 2074021 GCGTCGAGGGCCTCCTTGTGC 2074041
| |||||| |||| ||||||
Sbjct 379426 GAGTCGAGCTCCTCTTTGTGC 379446
Score = 122 bits (134), Expect = 1e-21
Identities = 334/503 (66%), Gaps = 14/503 (3%)
Strand=Plus/Plus
Query 2069251 TGGTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCG 2069310
||||| ||||| |||||||||| | ||||| | | ||||||| |||||||||||
Sbjct 377560 TGGTCAACGGTGAACTGGATGGGGGCCGCGGCGGCTTGCGTGCGCAAGTAGTACATGCCA 377619
Query 2069311 GTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGC-AT--TC 2069367
|||||||| || | |||| || ||||||||||||||| || | | || |
Sbjct 377620 GTCTTGAGACCCAGCTTCCACCCGGCAAAGTGCATCGACGTGAT---CTTGCCCATGGTT 377676
Query 2069368 GGGACGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCC 2069427
||| | || | |||||| |||||| |||||||| | ||| ||||||||||
Sbjct 377677 GGGTCCTTCATGTGAATGTTGAGAGACTGGGACTGGTCGATAAAGGCACCGCGGTCGGCG 377736
Query 2069428 GCCATGTCGATGGTCACGCGGTTG-GACACCTCCCACACGGTCTTGAACAGGGCCTTGAG 2069486
||||| | | || | | || || | ||||| || |||||| |||| ||||| |
Sbjct 377737 GCCATCTGCACCA-CATGACGCTGCGAAATTTCCCAGACCGTCTTGTACAGAGCCTTTAC 377795
Query 2069487 ATGCGGCGGCACCTCGTCGTCATCAAAGCCCTGCACCGAGCCCTGCGCTGCGATGAGGCG 2069546
| || ||| | | | | || | ||| | |||||| | | | || |||| |||
Sbjct 377796 CT-CGCCGGGAA-TGTTGGGGAT----GTTCTGGATCGAGCCGTTCTCGGCAATGATGCG 377849
Query 2069547 GTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGCGGTT 2069606
| | | || | |||||| || | | | || || || ||||
Sbjct 377850 ATTCTTCATGGCGTCTGACCACAGACCCATGTCGACGAGATCCTTGAGAAGCCATGGGTT 377909
Query 2069607 GACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACCTC 2069666
||| || || ||||||| || ||||| ||| ||| |||||| |||| | |||
Sbjct 377910 GACGACCTGGAACTCGCCCGCCAGGACGCGTCGCTGGTAAATGTTGGACGTGTAGGGCTC 377969
Query 2069667 GCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAG 2069726
| | |||| |||||||||| ||||||||||| | |||||||||||| |||| | ||
Sbjct 377970 GAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGGACGCCGTGGGCATGGGCGCGAGCAG 378029
Query 2069727 CAGCGAGTTGCGCAGGCCGTACT 2069749
|||||||||||| | |||| ||
Sbjct 378030 CAGCGAGTTGCGAATCCCGTGCT 378052
Score = 120 bits (132), Expect = 5e-21
Identities = 174/244 (71%), Gaps = 4/244 (2%)
Strand=Plus/Plus
Query 2071771 GCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGC 2071830
|| ||||| || |||||| ||| ||| || || || ||| ||||| | |||
Sbjct 378718 GCCTCAAACTCGTCGCCGTAGCAGTCGGCGAGCCCAGGGCATTCGTTGGGGCACATGAGG 378777
Query 2071831 GACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCCACAGGCCGTAA 2071890
| ||||||||| || | || || ||| || |||||| ||||||| || ||
Sbjct 378778 GTCCAGTCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGGATCCACAG--CGCAA 378835
Query 2071891 --AAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGT 2071948
||||| ||||| || ||| ||||||||||||||||||||| | || || || | |
Sbjct 378836 GGAAGAGGTCGCGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTTCTGAGATCAAGGAATT 378895
Query 2071949 CGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGC 2072008
| | || ||||||||||| |||||||||||| ||| ||||||||| |||||| ||
Sbjct 378896 CAAAGACATCGGCGTGCCAGGGCTCCAGGTAGATGGCGAAGGCGCCCGGTCGCTTGTTGC 378955
Query 2072009 CGCC 2072012
||||
Sbjct 378956 CGCC 378959
>seq2
Length=1393780
Score = 118 bits (130), Expect = 2e-20
Identities = 89/105 (85%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 2035651 CCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTA 2035710
||||||||||||| |||||||| | ||||| |||| ||||| || || |||||| | |
Sbjct 81799 CCAACTACCTCGATATCAAGCCTTTGCTCGACGTGGGCTGCAAAACTGTCGCCAACATGA 81858
Query 2035711 TCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
||||||||||||| |||||||| ||||||||||| || |||||||
Sbjct 81859 TCAAGGGCAAGTCCCCCGAGGAAATCCGCAAGACTTTCAACATCA 81903
>seq32
Length=314566
Score = 113 bits (124), Expect = 7e-19
Identities = 177/251 (71%), Gaps = 2/251 (1%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || || ||| ||| ||||||||||||||||| | |
Sbjct 224949 TGACACCGGCCTTCTGGTATTCACCAACTCGCTTCTCAAAAAAGTTGGTCTTGCCACCCA 225008
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
| ||||| |||||| | ||||| || || ||| ||| ||| || |||||
Sbjct 225009 GGGAGATATTCTCCATAAAATCAAACGGATTCGCTGTCTTGTACACCTTTTCATTCCCGA 225068
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | | | |||||||||||| |||||||| ||||| || ||| || | || |||||
Sbjct 225069 GAGCAACCAACAGGCGGTCGGCAACGAATTCGATGTATTGCTTCATCAGTGTGGAGTTCA 225128
Query 794071 TGCCGATGAGCGC-CACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129
|||||| || || ||| ||||| | ||| | | || |||| ||| || ||||||
Sbjct 225129 TGCCGAGAAGAGCGCAC-GGCAGAGCCTCCGTCAGGAAATCTTGCTCAATGGTGACGGCA 225187
Query 794130 TCGATGATGAT 794140
||| |||||||
Sbjct 225188 TCGGTGATGAT 225198
Score = 87.8 bits (96), Expect = 3e-11
Identities = 73/86 (85%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGA--GA 794434
|| ||||||||||||||||||||||||||||||||||||| || | | ||| | | ||
Sbjct 225308 AGCCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGG-AC-GCGAATGCACCACTGA 225365
Query 794435 AAAAGATGCCCTCGACGGCGGCAAAG 794460
| |||||||||||||| ||||| |||
Sbjct 225366 AGAAGATGCCCTCGACAGCGGCGAAG 225391
>seq84
Length=87919
Score = 95.1 bits (104), Expect = 2e-13
Identities = 135/189 (71%), Gaps = 1/189 (1%)
Strand=Plus/Plus
Query 2019192 GACCT-GCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTC 2019250
||||| ||| || |||||||||||| | |||| ||||| || |||||| || | || ||
Sbjct 17631 GACCTTGCCTCCTGGCCGCCACAAGCTCGTCATACTCGACGAAGCCGACAGCATGACCTC 17690
Query 2019251 GGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGC 2019310
| || |||||||||||||| || ||||||| ||| |||||||||| || || ||
Sbjct 17691 TGGCGCACAGCAGGCCCTCCGCCGAACTATGGAAATATACTCCAACACGACTCGATTCGC 17750
Query 2019311 GCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTT 2019370
| || || ||| ||| | | || ||| | || ||| |||||||||||| |
Sbjct 17751 ATTCGCGTGTAACCAGTCAAACAAAATTATTGAACCGCTGCAGTCACGTTGCGCCATCCT 17810
Query 2019371 GCGCTTTGC 2019379
|| | |||
Sbjct 17811 TCGATATGC 17819
>seq36
Length=277325
Score = 91.5 bits (100), Expect = 2e-12
Identities = 103/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 653749 CACGCCCGACATCGTCATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGAT 653808
|||||| |||||| ||||||||||||||||||| |||||||| ||||| || | | | |
Sbjct 33487 CACGCCAGACATCATCATCAACCCGCACGCCATTCCGTCGCGAATGACAATTGCCCACTT 33428
Query 653809 GATGGAGGCCCTCCTGGGCAAGGTGGCCTGCCGCGAGGGCTACGTGGGCGACGGCACCCC 653868
||| ||| ||| || |||||||| || | |||||| | |||||| | ||| ||
Sbjct 33427 GATCGAGTGCCTGCTAAGCAAGGTGTCCACGCTGGAGGGCATGGAGGGCGATGCCACGCC 33368
Query 653869 GTTTGGCGGCGTCACCGT 653886
||| || ||| || ||
Sbjct 33367 CTTTACCGACGTGACAGT 33350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916231613936021
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